Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
FOXR1Q6PIV2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.17■■□□□ 1.94
FOXR1Q6PIV2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
FOXR1Q6PIV2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.16■■□□□ 1.94
FOXR1Q6PIV2 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.16■■□□□ 1.94
FOXR1Q6PIV2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.15■■□□□ 1.94
FOXR1Q6PIV2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
FOXR1Q6PIV2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
FOXR1Q6PIV2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
FOXR1Q6PIV2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
FOXR1Q6PIV2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
FOXR1Q6PIV2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.11■■□□□ 1.93
FOXR1Q6PIV2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
FOXR1Q6PIV2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
FOXR1Q6PIV2 AL121749.1-202ENST00000609313 2153 ntBASIC27.11■■□□□ 1.93
FOXR1Q6PIV2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
FOXR1Q6PIV2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
FOXR1Q6PIV2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
FOXR1Q6PIV2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
FOXR1Q6PIV2 ST7-AS1-201ENST00000456775 1889 ntBASIC27.09■■□□□ 1.93
FOXR1Q6PIV2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.09■■□□□ 1.93
FOXR1Q6PIV2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
FOXR1Q6PIV2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.08■■□□□ 1.93
FOXR1Q6PIV2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
FOXR1Q6PIV2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
FOXR1Q6PIV2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
FOXR1Q6PIV2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
FOXR1Q6PIV2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.05■■□□□ 1.92
FOXR1Q6PIV2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXR1Q6PIV2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXR1Q6PIV2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXR1Q6PIV2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXR1Q6PIV2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXR1Q6PIV2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
FOXR1Q6PIV2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.03■■□□□ 1.92
FOXR1Q6PIV2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
FOXR1Q6PIV2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
FOXR1Q6PIV2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.92
FOXR1Q6PIV2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
FOXR1Q6PIV2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
FOXR1Q6PIV2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
FOXR1Q6PIV2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
FOXR1Q6PIV2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27■■□□□ 1.91
FOXR1Q6PIV2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
FOXR1Q6PIV2 CAHM-201ENST00000604200 896 ntBASIC26.99■■□□□ 1.91
FOXR1Q6PIV2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
FOXR1Q6PIV2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
FOXR1Q6PIV2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
FOXR1Q6PIV2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
FOXR1Q6PIV2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
FOXR1Q6PIV2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
FOXR1Q6PIV2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
FOXR1Q6PIV2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
FOXR1Q6PIV2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
FOXR1Q6PIV2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
FOXR1Q6PIV2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
FOXR1Q6PIV2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.94■■□□□ 1.9
FOXR1Q6PIV2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
FOXR1Q6PIV2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
FOXR1Q6PIV2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.92■■□□□ 1.9
FOXR1Q6PIV2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
FOXR1Q6PIV2 AL162393.1-201ENST00000437852 946 ntBASIC26.91■■□□□ 1.9
FOXR1Q6PIV2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.91■■□□□ 1.9
FOXR1Q6PIV2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
FOXR1Q6PIV2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
FOXR1Q6PIV2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
FOXR1Q6PIV2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
FOXR1Q6PIV2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
FOXR1Q6PIV2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
FOXR1Q6PIV2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.9■■□□□ 1.9
FOXR1Q6PIV2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
FOXR1Q6PIV2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
FOXR1Q6PIV2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
FOXR1Q6PIV2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.87■■□□□ 1.89
FOXR1Q6PIV2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
FOXR1Q6PIV2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
FOXR1Q6PIV2 AL391121.1-201ENST00000607967 1349 ntBASIC26.87■■□□□ 1.89
FOXR1Q6PIV2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
FOXR1Q6PIV2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
FOXR1Q6PIV2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
FOXR1Q6PIV2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
FOXR1Q6PIV2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
FOXR1Q6PIV2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
FOXR1Q6PIV2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
FOXR1Q6PIV2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
FOXR1Q6PIV2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
FOXR1Q6PIV2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
FOXR1Q6PIV2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
FOXR1Q6PIV2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.83■■□□□ 1.89
FOXR1Q6PIV2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
FOXR1Q6PIV2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
FOXR1Q6PIV2 AL133380.1-201ENST00000506013 324 ntBASIC26.82■■□□□ 1.88
FOXR1Q6PIV2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.81■■□□□ 1.88
FOXR1Q6PIV2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
FOXR1Q6PIV2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
FOXR1Q6PIV2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
FOXR1Q6PIV2 AP006261.1-201ENST00000584783 668 ntBASIC26.81■■□□□ 1.88
FOXR1Q6PIV2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
FOXR1Q6PIV2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
FOXR1Q6PIV2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms