Protein–RNA interactions for Protein: Q6P1N0

CC2D1A, Coiled-coil and C2 domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CC2D1AQ6P1N0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CC2D1AQ6P1N0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CC2D1AQ6P1N0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CC2D1AQ6P1N0 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.47■■■□□ 2.15
CC2D1AQ6P1N0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.46■■■□□ 2.15
CC2D1AQ6P1N0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CC2D1AQ6P1N0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CC2D1AQ6P1N0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CC2D1AQ6P1N0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
CC2D1AQ6P1N0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.43■■■□□ 2.14
CC2D1AQ6P1N0 MIR762-201ENST00000390236 83 ntBASIC28.43■■■□□ 2.14
CC2D1AQ6P1N0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CC2D1AQ6P1N0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CC2D1AQ6P1N0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.42■■■□□ 2.14
CC2D1AQ6P1N0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.42■■■□□ 2.14
CC2D1AQ6P1N0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.42■■■□□ 2.14
CC2D1AQ6P1N0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CC2D1AQ6P1N0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
CC2D1AQ6P1N0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CC2D1AQ6P1N0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CC2D1AQ6P1N0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
CC2D1AQ6P1N0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.4■■■□□ 2.14
CC2D1AQ6P1N0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CC2D1AQ6P1N0 AC005559.1-201ENST00000589661 871 ntBASIC28.39■■■□□ 2.14
CC2D1AQ6P1N0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
CC2D1AQ6P1N0 DUX4L28-201ENST00000623687 678 ntBASIC28.37■■■□□ 2.13
CC2D1AQ6P1N0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.37■■■□□ 2.13
CC2D1AQ6P1N0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CC2D1AQ6P1N0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.35■■■□□ 2.13
CC2D1AQ6P1N0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.35■■■□□ 2.13
CC2D1AQ6P1N0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CC2D1AQ6P1N0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CC2D1AQ6P1N0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CC2D1AQ6P1N0 WASH5P-204ENST00000632292 975 ntBASIC28.34■■■□□ 2.13
CC2D1AQ6P1N0 AC087741.3-201ENST00000624270 1347 ntBASIC28.34■■■□□ 2.13
CC2D1AQ6P1N0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.33■■■□□ 2.13
CC2D1AQ6P1N0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.33■■■□□ 2.13
CC2D1AQ6P1N0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.33■■■□□ 2.12
CC2D1AQ6P1N0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.32■■■□□ 2.12
CC2D1AQ6P1N0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CC2D1AQ6P1N0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CC2D1AQ6P1N0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CC2D1AQ6P1N0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.32■■■□□ 2.12
CC2D1AQ6P1N0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.3■■■□□ 2.12
CC2D1AQ6P1N0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CC2D1AQ6P1N0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
CC2D1AQ6P1N0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.3■■■□□ 2.12
CC2D1AQ6P1N0 AC044849.2-201ENST00000606596 710 ntBASIC28.3■■■□□ 2.12
CC2D1AQ6P1N0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CC2D1AQ6P1N0 ST7-AS1-201ENST00000456775 1889 ntBASIC28.29■■■□□ 2.12
CC2D1AQ6P1N0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.29■■■□□ 2.12
CC2D1AQ6P1N0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.29■■■□□ 2.12
CC2D1AQ6P1N0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CC2D1AQ6P1N0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
CC2D1AQ6P1N0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CC2D1AQ6P1N0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.27■■■□□ 2.12
CC2D1AQ6P1N0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CC2D1AQ6P1N0 AC142086.6-201ENST00000621154 1765 ntBASIC28.26■■■□□ 2.11
CC2D1AQ6P1N0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CC2D1AQ6P1N0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.26■■■□□ 2.11
CC2D1AQ6P1N0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
CC2D1AQ6P1N0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CC2D1AQ6P1N0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CC2D1AQ6P1N0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CC2D1AQ6P1N0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CC2D1AQ6P1N0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CC2D1AQ6P1N0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CC2D1AQ6P1N0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.2■■■□□ 2.1
CC2D1AQ6P1N0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.2■■■□□ 2.1
CC2D1AQ6P1N0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
CC2D1AQ6P1N0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CC2D1AQ6P1N0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CC2D1AQ6P1N0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CC2D1AQ6P1N0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
CC2D1AQ6P1N0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CC2D1AQ6P1N0 ABHD17AP4-201ENST00000411545 909 ntBASIC28.19■■■□□ 2.1
CC2D1AQ6P1N0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CC2D1AQ6P1N0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.19■■■□□ 2.1
CC2D1AQ6P1N0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
CC2D1AQ6P1N0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CC2D1AQ6P1N0 AC135731.1-201ENST00000569415 2548 ntBASIC28.18■■■□□ 2.1
CC2D1AQ6P1N0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CC2D1AQ6P1N0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CC2D1AQ6P1N0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CC2D1AQ6P1N0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CC2D1AQ6P1N0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CC2D1AQ6P1N0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CC2D1AQ6P1N0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CC2D1AQ6P1N0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CC2D1AQ6P1N0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CC2D1AQ6P1N0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CC2D1AQ6P1N0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CC2D1AQ6P1N0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
CC2D1AQ6P1N0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CC2D1AQ6P1N0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CC2D1AQ6P1N0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CC2D1AQ6P1N0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.13■■■□□ 2.09
CC2D1AQ6P1N0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.13■■■□□ 2.09
CC2D1AQ6P1N0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CC2D1AQ6P1N0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms