Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.42■■□□□ 1.18
SpenQ62504 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SpenQ62504 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SpenQ62504 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.41■■□□□ 1.18
SpenQ62504 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SpenQ62504 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SpenQ62504 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SpenQ62504 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SpenQ62504 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SpenQ62504 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SpenQ62504 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SpenQ62504 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SpenQ62504 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SpenQ62504 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SpenQ62504 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SpenQ62504 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SpenQ62504 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SpenQ62504 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SpenQ62504 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SpenQ62504 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SpenQ62504 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpenQ62504 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpenQ62504 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SpenQ62504 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SpenQ62504 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.34■■□□□ 1.17
SpenQ62504 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.17
SpenQ62504 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SpenQ62504 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.33■■□□□ 1.16
SpenQ62504 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.32■■□□□ 1.16
SpenQ62504 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SpenQ62504 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.32■■□□□ 1.16
SpenQ62504 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SpenQ62504 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.31■■□□□ 1.16
SpenQ62504 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SpenQ62504 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SpenQ62504 Gm15039-201ENSMUST00000118914 875 ntBASIC22.3■■□□□ 1.16
SpenQ62504 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SpenQ62504 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
SpenQ62504 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SpenQ62504 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SpenQ62504 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SpenQ62504 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.26■■□□□ 1.15
SpenQ62504 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.26■■□□□ 1.15
SpenQ62504 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SpenQ62504 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SpenQ62504 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SpenQ62504 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SpenQ62504 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SpenQ62504 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SpenQ62504 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SpenQ62504 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SpenQ62504 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SpenQ62504 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SpenQ62504 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SpenQ62504 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SpenQ62504 Gm6311-201ENSMUST00000073790 878 ntBASIC22.23■■□□□ 1.15
SpenQ62504 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SpenQ62504 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SpenQ62504 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SpenQ62504 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.2■■□□□ 1.14
SpenQ62504 Gm4799-201ENSMUST00000095396 657 ntBASIC22.19■■□□□ 1.14
SpenQ62504 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SpenQ62504 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SpenQ62504 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SpenQ62504 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SpenQ62504 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SpenQ62504 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SpenQ62504 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.15■■□□□ 1.14
SpenQ62504 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.14■■□□□ 1.13
SpenQ62504 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SpenQ62504 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.13■■□□□ 1.13
SpenQ62504 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SpenQ62504 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.13■■□□□ 1.13
SpenQ62504 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SpenQ62504 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpenQ62504 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.12■■□□□ 1.13
SpenQ62504 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpenQ62504 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.12■■□□□ 1.13
SpenQ62504 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.11■■□□□ 1.13
SpenQ62504 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.1■■□□□ 1.13
SpenQ62504 Gm12366-201ENSMUST00000121722 873 ntBASIC22.1■■□□□ 1.13
SpenQ62504 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.1■■□□□ 1.13
SpenQ62504 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.1■■□□□ 1.13
SpenQ62504 Gm5786-201ENSMUST00000085368 882 ntBASIC22.1■■□□□ 1.13
SpenQ62504 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SpenQ62504 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SpenQ62504 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SpenQ62504 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SpenQ62504 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SpenQ62504 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SpenQ62504 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SpenQ62504 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SpenQ62504 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SpenQ62504 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms