Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cmc4Q61908 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cmc4Q61908 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cmc4Q61908 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cmc4Q61908 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cmc4Q61908 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cmc4Q61908 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cmc4Q61908 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cmc4Q61908 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cmc4Q61908 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.75■□□□□ 0.43
Cmc4Q61908 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cmc4Q61908 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cmc4Q61908 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cmc4Q61908 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cmc4Q61908 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cmc4Q61908 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.74■□□□□ 0.43
Cmc4Q61908 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cmc4Q61908 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cmc4Q61908 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cmc4Q61908 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cmc4Q61908 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cmc4Q61908 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cmc4Q61908 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cmc4Q61908 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cmc4Q61908 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Cmc4Q61908 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cmc4Q61908 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cmc4Q61908 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cmc4Q61908 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cmc4Q61908 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cmc4Q61908 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cmc4Q61908 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cmc4Q61908 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cmc4Q61908 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cmc4Q61908 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cmc4Q61908 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cmc4Q61908 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cmc4Q61908 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cmc4Q61908 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cmc4Q61908 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cmc4Q61908 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cmc4Q61908 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cmc4Q61908 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Cmc4Q61908 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cmc4Q61908 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cmc4Q61908 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cmc4Q61908 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.65■□□□□ 0.42
Cmc4Q61908 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.65■□□□□ 0.42
Cmc4Q61908 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cmc4Q61908 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cmc4Q61908 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cmc4Q61908 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cmc4Q61908 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cmc4Q61908 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cmc4Q61908 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cmc4Q61908 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cmc4Q61908 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cmc4Q61908 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cmc4Q61908 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cmc4Q61908 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cmc4Q61908 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cmc4Q61908 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cmc4Q61908 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cmc4Q61908 Zxda-201ENSMUST00000117281 2621 ntBASIC17.61■□□□□ 0.41
Cmc4Q61908 Nkain2-201ENSMUST00000092602 558 ntBASIC17.61■□□□□ 0.41
Cmc4Q61908 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cmc4Q61908 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Cmc4Q61908 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cmc4Q61908 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cmc4Q61908 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cmc4Q61908 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cmc4Q61908 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cmc4Q61908 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cmc4Q61908 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cmc4Q61908 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cmc4Q61908 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cmc4Q61908 Gm6821-201ENSMUST00000107540 542 ntBASIC17.57■□□□□ 0.4
Cmc4Q61908 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.57■□□□□ 0.4
Cmc4Q61908 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cmc4Q61908 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmc4Q61908 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmc4Q61908 Gm8503-201ENSMUST00000118131 455 ntBASIC17.55■□□□□ 0.4
Cmc4Q61908 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmc4Q61908 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cmc4Q61908 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.54■□□□□ 0.4
Cmc4Q61908 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cmc4Q61908 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cmc4Q61908 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cmc4Q61908 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.53■□□□□ 0.4
Cmc4Q61908 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cmc4Q61908 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cmc4Q61908 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmc4Q61908 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmc4Q61908 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmc4Q61908 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.51■□□□□ 0.39
Cmc4Q61908 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cmc4Q61908 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.51■□□□□ 0.39
Cmc4Q61908 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cmc4Q61908 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cmc4Q61908 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms