Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Scarb1Q61009 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scarb1Q61009 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scarb1Q61009 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scarb1Q61009 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.26■□□□□ 0.83
Scarb1Q61009 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarb1Q61009 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarb1Q61009 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarb1Q61009 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scarb1Q61009 Peli2-204ENSMUST00000226513 1320 ntBASIC20.25■□□□□ 0.83
Scarb1Q61009 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scarb1Q61009 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.24■□□□□ 0.83
Scarb1Q61009 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Scarb1Q61009 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarb1Q61009 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Scarb1Q61009 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scarb1Q61009 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scarb1Q61009 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scarb1Q61009 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Scarb1Q61009 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scarb1Q61009 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scarb1Q61009 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scarb1Q61009 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scarb1Q61009 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scarb1Q61009 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scarb1Q61009 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Scarb1Q61009 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scarb1Q61009 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scarb1Q61009 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scarb1Q61009 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.17■□□□□ 0.82
Scarb1Q61009 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Scarb1Q61009 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scarb1Q61009 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
Scarb1Q61009 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scarb1Q61009 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scarb1Q61009 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Scarb1Q61009 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Scarb1Q61009 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scarb1Q61009 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scarb1Q61009 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Scarb1Q61009 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scarb1Q61009 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scarb1Q61009 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scarb1Q61009 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Scarb1Q61009 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Scarb1Q61009 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scarb1Q61009 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scarb1Q61009 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scarb1Q61009 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Scarb1Q61009 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scarb1Q61009 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scarb1Q61009 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scarb1Q61009 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scarb1Q61009 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scarb1Q61009 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scarb1Q61009 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scarb1Q61009 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Scarb1Q61009 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarb1Q61009 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarb1Q61009 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Scarb1Q61009 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarb1Q61009 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarb1Q61009 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scarb1Q61009 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.06■□□□□ 0.8
Scarb1Q61009 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarb1Q61009 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarb1Q61009 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scarb1Q61009 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scarb1Q61009 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scarb1Q61009 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scarb1Q61009 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scarb1Q61009 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Scarb1Q61009 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scarb1Q61009 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scarb1Q61009 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scarb1Q61009 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.01■□□□□ 0.79
Scarb1Q61009 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scarb1Q61009 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scarb1Q61009 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scarb1Q61009 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scarb1Q61009 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scarb1Q61009 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scarb1Q61009 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scarb1Q61009 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scarb1Q61009 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Scarb1Q61009 Gm26115-201ENSMUST00000175605 87 ntBASIC19.98■□□□□ 0.79
Scarb1Q61009 Gm8109-201ENSMUST00000194076 746 ntBASIC19.98■□□□□ 0.79
Scarb1Q61009 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scarb1Q61009 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scarb1Q61009 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scarb1Q61009 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Scarb1Q61009 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scarb1Q61009 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Scarb1Q61009 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scarb1Q61009 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scarb1Q61009 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scarb1Q61009 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.96■□□□□ 0.79
Scarb1Q61009 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scarb1Q61009 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scarb1Q61009 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms