Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CDKAL1Q5VV42 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDKAL1Q5VV42 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
CDKAL1Q5VV42 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CDKAL1Q5VV42 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
CDKAL1Q5VV42 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CDKAL1Q5VV42 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.92■■■□□ 2.22
CDKAL1Q5VV42 AC010864.1-201ENST00000609407 1511 ntBASIC28.91■■■□□ 2.22
CDKAL1Q5VV42 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CDKAL1Q5VV42 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
CDKAL1Q5VV42 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CDKAL1Q5VV42 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.89■■■□□ 2.22
CDKAL1Q5VV42 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
CDKAL1Q5VV42 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDKAL1Q5VV42 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDKAL1Q5VV42 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.88■■■□□ 2.21
CDKAL1Q5VV42 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.87■■■□□ 2.21
CDKAL1Q5VV42 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CDKAL1Q5VV42 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDKAL1Q5VV42 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
CDKAL1Q5VV42 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.86■■■□□ 2.21
CDKAL1Q5VV42 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDKAL1Q5VV42 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDKAL1Q5VV42 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.84■■■□□ 2.21
CDKAL1Q5VV42 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDKAL1Q5VV42 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDKAL1Q5VV42 DRD5P2-201ENST00000421395 2012 ntBASIC28.84■■■□□ 2.21
CDKAL1Q5VV42 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDKAL1Q5VV42 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
CDKAL1Q5VV42 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
CDKAL1Q5VV42 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CDKAL1Q5VV42 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDKAL1Q5VV42 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDKAL1Q5VV42 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.8■■■□□ 2.2
CDKAL1Q5VV42 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
CDKAL1Q5VV42 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.79■■■□□ 2.2
CDKAL1Q5VV42 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDKAL1Q5VV42 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDKAL1Q5VV42 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.78■■■□□ 2.2
CDKAL1Q5VV42 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.78■■■□□ 2.2
CDKAL1Q5VV42 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.77■■■□□ 2.2
CDKAL1Q5VV42 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDKAL1Q5VV42 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDKAL1Q5VV42 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.76■■■□□ 2.19
CDKAL1Q5VV42 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.75■■■□□ 2.19
CDKAL1Q5VV42 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CDKAL1Q5VV42 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDKAL1Q5VV42 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDKAL1Q5VV42 RARRES2P7-201ENST00000567349 469 ntBASIC28.74■■■□□ 2.19
CDKAL1Q5VV42 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDKAL1Q5VV42 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CDKAL1Q5VV42 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDKAL1Q5VV42 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDKAL1Q5VV42 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDKAL1Q5VV42 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDKAL1Q5VV42 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CDKAL1Q5VV42 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.73■■■□□ 2.19
CDKAL1Q5VV42 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CDKAL1Q5VV42 SETD8P1-201ENST00000623146 1180 ntBASIC28.73■■■□□ 2.19
CDKAL1Q5VV42 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.73■■■□□ 2.19
CDKAL1Q5VV42 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CDKAL1Q5VV42 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CDKAL1Q5VV42 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.71■■■□□ 2.19
CDKAL1Q5VV42 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
CDKAL1Q5VV42 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.69■■■□□ 2.18
CDKAL1Q5VV42 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CDKAL1Q5VV42 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDKAL1Q5VV42 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CDKAL1Q5VV42 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.68■■■□□ 2.18
CDKAL1Q5VV42 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
CDKAL1Q5VV42 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CDKAL1Q5VV42 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDKAL1Q5VV42 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDKAL1Q5VV42 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDKAL1Q5VV42 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDKAL1Q5VV42 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
CDKAL1Q5VV42 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CDKAL1Q5VV42 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CDKAL1Q5VV42 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.63■■■□□ 2.17
CDKAL1Q5VV42 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.63■■■□□ 2.17
CDKAL1Q5VV42 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.62■■■□□ 2.17
CDKAL1Q5VV42 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDKAL1Q5VV42 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDKAL1Q5VV42 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDKAL1Q5VV42 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDKAL1Q5VV42 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.6■■■□□ 2.17
CDKAL1Q5VV42 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CDKAL1Q5VV42 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDKAL1Q5VV42 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDKAL1Q5VV42 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDKAL1Q5VV42 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.58■■■□□ 2.17
CDKAL1Q5VV42 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDKAL1Q5VV42 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDKAL1Q5VV42 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.57■■■□□ 2.16
CDKAL1Q5VV42 AL391121.1-201ENST00000607967 1349 ntBASIC28.57■■■□□ 2.16
CDKAL1Q5VV42 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDKAL1Q5VV42 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDKAL1Q5VV42 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDKAL1Q5VV42 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDKAL1Q5VV42 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms