Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trav8d-1Q5R1H8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav8d-1Q5R1H8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav8d-1Q5R1H8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.58■□□□□ 0.73
Trav8d-1Q5R1H8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav8d-1Q5R1H8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav8d-1Q5R1H8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-1Q5R1H8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-1Q5R1H8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-1Q5R1H8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8d-1Q5R1H8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-1Q5R1H8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-1Q5R1H8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8d-1Q5R1H8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-1Q5R1H8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trav8d-1Q5R1H8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8d-1Q5R1H8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8d-1Q5R1H8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8d-1Q5R1H8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8d-1Q5R1H8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8d-1Q5R1H8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav8d-1Q5R1H8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav8d-1Q5R1H8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trav8d-1Q5R1H8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.51■□□□□ 0.71
Trav8d-1Q5R1H8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav8d-1Q5R1H8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav8d-1Q5R1H8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav8d-1Q5R1H8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav8d-1Q5R1H8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav8d-1Q5R1H8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.49■□□□□ 0.71
Trav8d-1Q5R1H8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.49■□□□□ 0.71
Trav8d-1Q5R1H8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.49■□□□□ 0.71
Trav8d-1Q5R1H8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav8d-1Q5R1H8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav8d-1Q5R1H8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav8d-1Q5R1H8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav8d-1Q5R1H8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav8d-1Q5R1H8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trav8d-1Q5R1H8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav8d-1Q5R1H8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.47■□□□□ 0.71
Trav8d-1Q5R1H8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav8d-1Q5R1H8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-1Q5R1H8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav8d-1Q5R1H8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-1Q5R1H8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav8d-1Q5R1H8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.44■□□□□ 0.7
Trav8d-1Q5R1H8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav8d-1Q5R1H8 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.44■□□□□ 0.7
Trav8d-1Q5R1H8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trav8d-1Q5R1H8 Zfp131-205ENSMUST00000223812 663 ntBASIC19.44■□□□□ 0.7
Trav8d-1Q5R1H8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav8d-1Q5R1H8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-1Q5R1H8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-1Q5R1H8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-1Q5R1H8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-1Q5R1H8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav8d-1Q5R1H8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.43■□□□□ 0.7
Trav8d-1Q5R1H8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav8d-1Q5R1H8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8d-1Q5R1H8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8d-1Q5R1H8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.41■□□□□ 0.7
Trav8d-1Q5R1H8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8d-1Q5R1H8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8d-1Q5R1H8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8d-1Q5R1H8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Trav8d-1Q5R1H8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8d-1Q5R1H8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8d-1Q5R1H8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8d-1Q5R1H8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trav8d-1Q5R1H8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav8d-1Q5R1H8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav8d-1Q5R1H8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav8d-1Q5R1H8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.38■□□□□ 0.69
Trav8d-1Q5R1H8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Trav8d-1Q5R1H8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8d-1Q5R1H8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trav8d-1Q5R1H8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-1Q5R1H8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-1Q5R1H8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8d-1Q5R1H8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Trav8d-1Q5R1H8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-1Q5R1H8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trav8d-1Q5R1H8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-1Q5R1H8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-1Q5R1H8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8d-1Q5R1H8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8d-1Q5R1H8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.34■□□□□ 0.69
Trav8d-1Q5R1H8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8d-1Q5R1H8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8d-1Q5R1H8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-1Q5R1H8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-1Q5R1H8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-1Q5R1H8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Trav8d-1Q5R1H8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8d-1Q5R1H8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.31■□□□□ 0.68
Trav8d-1Q5R1H8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8d-1Q5R1H8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trav8d-1Q5R1H8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8d-1Q5R1H8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trav8d-1Q5R1H8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms