Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rnf43Q5NCP0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.11■■□□□ 1.61
Rnf43Q5NCP0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rnf43Q5NCP0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf43Q5NCP0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.1■■□□□ 1.61
Rnf43Q5NCP0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf43Q5NCP0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.08■■□□□ 1.61
Rnf43Q5NCP0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Rnf43Q5NCP0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.08■■□□□ 1.61
Rnf43Q5NCP0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.07■■□□□ 1.6
Rnf43Q5NCP0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Rnf43Q5NCP0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf43Q5NCP0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.05■■□□□ 1.6
Rnf43Q5NCP0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Rnf43Q5NCP0 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.04■■□□□ 1.6
Rnf43Q5NCP0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.03■■□□□ 1.6
Rnf43Q5NCP0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.02■■□□□ 1.6
Rnf43Q5NCP0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.02■■□□□ 1.6
Rnf43Q5NCP0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Rnf43Q5NCP0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rnf43Q5NCP0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Rnf43Q5NCP0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rnf43Q5NCP0 Mir6538-201ENSMUST00000183713 110 ntBASIC24.99■■□□□ 1.59
Rnf43Q5NCP0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Rnf43Q5NCP0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Rnf43Q5NCP0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rnf43Q5NCP0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.97■■□□□ 1.59
Rnf43Q5NCP0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rnf43Q5NCP0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rnf43Q5NCP0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rnf43Q5NCP0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.95■■□□□ 1.58
Rnf43Q5NCP0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf43Q5NCP0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf43Q5NCP0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf43Q5NCP0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf43Q5NCP0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf43Q5NCP0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf43Q5NCP0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rnf43Q5NCP0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rnf43Q5NCP0 Gm11175-201ENSMUST00000116172 543 ntBASIC24.92■■□□□ 1.58
Rnf43Q5NCP0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.91■■□□□ 1.58
Rnf43Q5NCP0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.9■■□□□ 1.58
Rnf43Q5NCP0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.89■■□□□ 1.58
Rnf43Q5NCP0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Rnf43Q5NCP0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Rnf43Q5NCP0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rnf43Q5NCP0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.86■■□□□ 1.57
Rnf43Q5NCP0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Rnf43Q5NCP0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Rnf43Q5NCP0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.85■■□□□ 1.57
Rnf43Q5NCP0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rnf43Q5NCP0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rnf43Q5NCP0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.84■■□□□ 1.57
Rnf43Q5NCP0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rnf43Q5NCP0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Rnf43Q5NCP0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rnf43Q5NCP0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Rnf43Q5NCP0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Rnf43Q5NCP0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rnf43Q5NCP0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
Rnf43Q5NCP0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rnf43Q5NCP0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Rnf43Q5NCP0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf43Q5NCP0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf43Q5NCP0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf43Q5NCP0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Rnf43Q5NCP0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf43Q5NCP0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf43Q5NCP0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf43Q5NCP0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf43Q5NCP0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Rnf43Q5NCP0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rnf43Q5NCP0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
Rnf43Q5NCP0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rnf43Q5NCP0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf43Q5NCP0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf43Q5NCP0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.71■■□□□ 1.55
Rnf43Q5NCP0 Cap2-205ENSMUST00000225824 1634 ntBASIC24.71■■□□□ 1.55
Rnf43Q5NCP0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.7■■□□□ 1.54
Rnf43Q5NCP0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rnf43Q5NCP0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rnf43Q5NCP0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rnf43Q5NCP0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf43Q5NCP0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.68■■□□□ 1.54
Rnf43Q5NCP0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Rnf43Q5NCP0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.67■■□□□ 1.54
Rnf43Q5NCP0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rnf43Q5NCP0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rnf43Q5NCP0 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.66■■□□□ 1.54
Rnf43Q5NCP0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rnf43Q5NCP0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rnf43Q5NCP0 Gm6311-201ENSMUST00000073790 878 ntBASIC24.64■■□□□ 1.54
Rnf43Q5NCP0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.64■■□□□ 1.54
Rnf43Q5NCP0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf43Q5NCP0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.63■■□□□ 1.53
Rnf43Q5NCP0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf43Q5NCP0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rnf43Q5NCP0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rnf43Q5NCP0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.62■■□□□ 1.53
Rnf43Q5NCP0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms