Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.74■■□□□ 1.23
CHRFAM7AQ494W8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CHRFAM7AQ494W8 AC139426.1-201ENST00000568218 2529 ntBASIC22.73■■□□□ 1.23
CHRFAM7AQ494W8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHRFAM7AQ494W8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CHRFAM7AQ494W8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHRFAM7AQ494W8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.7■■□□□ 1.22
CHRFAM7AQ494W8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.7■■□□□ 1.22
CHRFAM7AQ494W8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHRFAM7AQ494W8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHRFAM7AQ494W8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHRFAM7AQ494W8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.69■■□□□ 1.22
CHRFAM7AQ494W8 ZNRF2P2-203ENST00000454624 420 ntBASIC22.69■■□□□ 1.22
CHRFAM7AQ494W8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.69■■□□□ 1.22
CHRFAM7AQ494W8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CHRFAM7AQ494W8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHRFAM7AQ494W8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHRFAM7AQ494W8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHRFAM7AQ494W8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
CHRFAM7AQ494W8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.68■■□□□ 1.22
CHRFAM7AQ494W8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHRFAM7AQ494W8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.67■■□□□ 1.22
CHRFAM7AQ494W8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHRFAM7AQ494W8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHRFAM7AQ494W8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRFAM7AQ494W8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRFAM7AQ494W8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.65■■□□□ 1.22
CHRFAM7AQ494W8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRFAM7AQ494W8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHRFAM7AQ494W8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHRFAM7AQ494W8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.64■■□□□ 1.21
CHRFAM7AQ494W8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.64■■□□□ 1.21
CHRFAM7AQ494W8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHRFAM7AQ494W8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHRFAM7AQ494W8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHRFAM7AQ494W8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.61■■□□□ 1.21
CHRFAM7AQ494W8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHRFAM7AQ494W8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.61■■□□□ 1.21
CHRFAM7AQ494W8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CHRFAM7AQ494W8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHRFAM7AQ494W8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
CHRFAM7AQ494W8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHRFAM7AQ494W8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHRFAM7AQ494W8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CHRFAM7AQ494W8 ST7-AS1-201ENST00000456775 1889 ntBASIC22.59■■□□□ 1.21
CHRFAM7AQ494W8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHRFAM7AQ494W8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CHRFAM7AQ494W8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CHRFAM7AQ494W8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHRFAM7AQ494W8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CHRFAM7AQ494W8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRFAM7AQ494W8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.56■■□□□ 1.2
CHRFAM7AQ494W8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRFAM7AQ494W8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHRFAM7AQ494W8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CHRFAM7AQ494W8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRFAM7AQ494W8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHRFAM7AQ494W8 AL161658.1-201ENST00000623641 1967 ntBASIC22.55■■□□□ 1.2
CHRFAM7AQ494W8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRFAM7AQ494W8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CHRFAM7AQ494W8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHRFAM7AQ494W8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHRFAM7AQ494W8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CHRFAM7AQ494W8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.52■■□□□ 1.2
CHRFAM7AQ494W8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHRFAM7AQ494W8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.51■■□□□ 1.19
CHRFAM7AQ494W8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
CHRFAM7AQ494W8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHRFAM7AQ494W8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRFAM7AQ494W8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHRFAM7AQ494W8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHRFAM7AQ494W8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHRFAM7AQ494W8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.49■■□□□ 1.19
CHRFAM7AQ494W8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CHRFAM7AQ494W8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHRFAM7AQ494W8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.48■■□□□ 1.19
CHRFAM7AQ494W8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CHRFAM7AQ494W8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHRFAM7AQ494W8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHRFAM7AQ494W8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CHRFAM7AQ494W8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.47■■□□□ 1.19
CHRFAM7AQ494W8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHRFAM7AQ494W8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CHRFAM7AQ494W8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHRFAM7AQ494W8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHRFAM7AQ494W8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHRFAM7AQ494W8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHRFAM7AQ494W8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHRFAM7AQ494W8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHRFAM7AQ494W8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHRFAM7AQ494W8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.44■■□□□ 1.18
CHRFAM7AQ494W8 DUX4L29-201ENST00000425409 679 ntBASIC22.44■■□□□ 1.18
CHRFAM7AQ494W8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.44■■□□□ 1.18
CHRFAM7AQ494W8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHRFAM7AQ494W8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHRFAM7AQ494W8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHRFAM7AQ494W8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CHRFAM7AQ494W8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHRFAM7AQ494W8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHRFAM7AQ494W8 MIR4449-201ENST00000578365 66 ntBASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms