Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smim9Q3V0X1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.62■□□□□ 0.57
Smim9Q3V0X1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim9Q3V0X1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.61■□□□□ 0.57
Smim9Q3V0X1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim9Q3V0X1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smim9Q3V0X1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.6■□□□□ 0.57
Smim9Q3V0X1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim9Q3V0X1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim9Q3V0X1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim9Q3V0X1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim9Q3V0X1 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.6■□□□□ 0.57
Smim9Q3V0X1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smim9Q3V0X1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Smim9Q3V0X1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smim9Q3V0X1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim9Q3V0X1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smim9Q3V0X1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smim9Q3V0X1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smim9Q3V0X1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smim9Q3V0X1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim9Q3V0X1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim9Q3V0X1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim9Q3V0X1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim9Q3V0X1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.56■□□□□ 0.56
Smim9Q3V0X1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Smim9Q3V0X1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smim9Q3V0X1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.55■□□□□ 0.56
Smim9Q3V0X1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smim9Q3V0X1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim9Q3V0X1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim9Q3V0X1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smim9Q3V0X1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim9Q3V0X1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim9Q3V0X1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smim9Q3V0X1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim9Q3V0X1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim9Q3V0X1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Smim9Q3V0X1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smim9Q3V0X1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim9Q3V0X1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smim9Q3V0X1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim9Q3V0X1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smim9Q3V0X1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smim9Q3V0X1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim9Q3V0X1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smim9Q3V0X1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smim9Q3V0X1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim9Q3V0X1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim9Q3V0X1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Smim9Q3V0X1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim9Q3V0X1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim9Q3V0X1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim9Q3V0X1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smim9Q3V0X1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smim9Q3V0X1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Smim9Q3V0X1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smim9Q3V0X1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smim9Q3V0X1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Smim9Q3V0X1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smim9Q3V0X1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim9Q3V0X1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim9Q3V0X1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim9Q3V0X1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim9Q3V0X1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smim9Q3V0X1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim9Q3V0X1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim9Q3V0X1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim9Q3V0X1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smim9Q3V0X1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim9Q3V0X1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim9Q3V0X1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim9Q3V0X1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Smim9Q3V0X1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smim9Q3V0X1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim9Q3V0X1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim9Q3V0X1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smim9Q3V0X1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smim9Q3V0X1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim9Q3V0X1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smim9Q3V0X1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.36■□□□□ 0.53
Smim9Q3V0X1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim9Q3V0X1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Smim9Q3V0X1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smim9Q3V0X1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smim9Q3V0X1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim9Q3V0X1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim9Q3V0X1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim9Q3V0X1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smim9Q3V0X1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.33■□□□□ 0.52
Smim9Q3V0X1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smim9Q3V0X1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Smim9Q3V0X1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smim9Q3V0X1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.33■□□□□ 0.52
Smim9Q3V0X1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smim9Q3V0X1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smim9Q3V0X1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.31■□□□□ 0.52
Smim9Q3V0X1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Smim9Q3V0X1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.31■□□□□ 0.52
Smim9Q3V0X1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms