Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Lins1Q3U1D0 Zxda-201ENSMUST00000117281 2621 ntBASIC29.35■■■□□ 2.29
Lins1Q3U1D0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.35■■■□□ 2.29
Lins1Q3U1D0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Lins1Q3U1D0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Lins1Q3U1D0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Lins1Q3U1D0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Lins1Q3U1D0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Lins1Q3U1D0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.3■■■□□ 2.28
Lins1Q3U1D0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
Lins1Q3U1D0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Lins1Q3U1D0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.27■■■□□ 2.28
Lins1Q3U1D0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.27■■■□□ 2.28
Lins1Q3U1D0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Lins1Q3U1D0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Lins1Q3U1D0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Lins1Q3U1D0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.25■■■□□ 2.27
Lins1Q3U1D0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Lins1Q3U1D0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.24■■■□□ 2.27
Lins1Q3U1D0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
Lins1Q3U1D0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Lins1Q3U1D0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Lins1Q3U1D0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.22■■■□□ 2.27
Lins1Q3U1D0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Lins1Q3U1D0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.27
Lins1Q3U1D0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Lins1Q3U1D0 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.19■■■□□ 2.26
Lins1Q3U1D0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Lins1Q3U1D0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Lins1Q3U1D0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Lins1Q3U1D0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Lins1Q3U1D0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Lins1Q3U1D0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
Lins1Q3U1D0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Lins1Q3U1D0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Lins1Q3U1D0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Lins1Q3U1D0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.14■■■□□ 2.26
Lins1Q3U1D0 Gm7432-201ENSMUST00000210343 879 ntBASIC29.13■■■□□ 2.25
Lins1Q3U1D0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
Lins1Q3U1D0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.12■■■□□ 2.25
Lins1Q3U1D0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Lins1Q3U1D0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Lins1Q3U1D0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.11■■■□□ 2.25
Lins1Q3U1D0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Lins1Q3U1D0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
Lins1Q3U1D0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Lins1Q3U1D0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.09■■■□□ 2.25
Lins1Q3U1D0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.08■■■□□ 2.25
Lins1Q3U1D0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Lins1Q3U1D0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Lins1Q3U1D0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.05■■■□□ 2.24
Lins1Q3U1D0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Lins1Q3U1D0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Lins1Q3U1D0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
Lins1Q3U1D0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.03■■■□□ 2.24
Lins1Q3U1D0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Lins1Q3U1D0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Lins1Q3U1D0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Lins1Q3U1D0 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.99■■■□□ 2.23
Lins1Q3U1D0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Lins1Q3U1D0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Lins1Q3U1D0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Lins1Q3U1D0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Lins1Q3U1D0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Lins1Q3U1D0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
Lins1Q3U1D0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.96■■■□□ 2.23
Lins1Q3U1D0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.96■■■□□ 2.23
Lins1Q3U1D0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Lins1Q3U1D0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Lins1Q3U1D0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Lins1Q3U1D0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.94■■■□□ 2.22
Lins1Q3U1D0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Lins1Q3U1D0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
Lins1Q3U1D0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Lins1Q3U1D0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Lins1Q3U1D0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.93■■■□□ 2.22
Lins1Q3U1D0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Lins1Q3U1D0 Gm11599-201ENSMUST00000118720 878 ntBASIC28.91■■■□□ 2.22
Lins1Q3U1D0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.91■■■□□ 2.22
Lins1Q3U1D0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Lins1Q3U1D0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.89■■■□□ 2.22
Lins1Q3U1D0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.89■■■□□ 2.22
Lins1Q3U1D0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.88■■■□□ 2.21
Lins1Q3U1D0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Lins1Q3U1D0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Lins1Q3U1D0 Amer2-203ENSMUST00000225247 2662 ntBASIC28.88■■■□□ 2.21
Lins1Q3U1D0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Lins1Q3U1D0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Lins1Q3U1D0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.87■■■□□ 2.21
Lins1Q3U1D0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Lins1Q3U1D0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Lins1Q3U1D0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Lins1Q3U1D0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Lins1Q3U1D0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Lins1Q3U1D0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Lins1Q3U1D0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Lins1Q3U1D0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Lins1Q3U1D0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
Lins1Q3U1D0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Lins1Q3U1D0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms