Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim63Q38HM4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim63Q38HM4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim63Q38HM4 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.11■□□□□ 0.81
Trim63Q38HM4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim63Q38HM4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim63Q38HM4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim63Q38HM4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim63Q38HM4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim63Q38HM4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim63Q38HM4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim63Q38HM4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Trim63Q38HM4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim63Q38HM4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim63Q38HM4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim63Q38HM4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim63Q38HM4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim63Q38HM4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim63Q38HM4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim63Q38HM4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim63Q38HM4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim63Q38HM4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim63Q38HM4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim63Q38HM4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim63Q38HM4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim63Q38HM4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim63Q38HM4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim63Q38HM4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim63Q38HM4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim63Q38HM4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim63Q38HM4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim63Q38HM4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim63Q38HM4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim63Q38HM4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim63Q38HM4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.03■□□□□ 0.8
Trim63Q38HM4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim63Q38HM4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trim63Q38HM4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim63Q38HM4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim63Q38HM4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim63Q38HM4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim63Q38HM4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim63Q38HM4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim63Q38HM4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim63Q38HM4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim63Q38HM4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Trim63Q38HM4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim63Q38HM4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim63Q38HM4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim63Q38HM4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.99■□□□□ 0.79
Trim63Q38HM4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim63Q38HM4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim63Q38HM4 Gm24109-201ENSMUST00000175489 103 ntBASIC19.98■□□□□ 0.79
Trim63Q38HM4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim63Q38HM4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim63Q38HM4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim63Q38HM4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Trim63Q38HM4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim63Q38HM4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim63Q38HM4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim63Q38HM4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim63Q38HM4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
Trim63Q38HM4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim63Q38HM4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim63Q38HM4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim63Q38HM4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim63Q38HM4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim63Q38HM4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim63Q38HM4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim63Q38HM4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim63Q38HM4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim63Q38HM4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim63Q38HM4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim63Q38HM4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim63Q38HM4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim63Q38HM4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim63Q38HM4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim63Q38HM4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim63Q38HM4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim63Q38HM4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim63Q38HM4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim63Q38HM4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trim63Q38HM4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim63Q38HM4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim63Q38HM4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim63Q38HM4 Gm23366-201ENSMUST00000175022 89 ntBASIC19.83■□□□□ 0.77
Trim63Q38HM4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim63Q38HM4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim63Q38HM4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim63Q38HM4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim63Q38HM4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim63Q38HM4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim63Q38HM4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim63Q38HM4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim63Q38HM4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim63Q38HM4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.81■□□□□ 0.76
Trim63Q38HM4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim63Q38HM4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim63Q38HM4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim63Q38HM4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms