Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
RFX7Q2KHR2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RFX7Q2KHR2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.15■■■□□ 2.74
RFX7Q2KHR2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RFX7Q2KHR2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.14■■■□□ 2.74
RFX7Q2KHR2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
RFX7Q2KHR2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RFX7Q2KHR2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.1■■■□□ 2.73
RFX7Q2KHR2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.1■■■□□ 2.73
RFX7Q2KHR2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RFX7Q2KHR2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.09■■■□□ 2.73
RFX7Q2KHR2 AL135925.1-201ENST00000605920 1701 ntBASIC32.09■■■□□ 2.73
RFX7Q2KHR2 ZNRF2P2-203ENST00000454624 420 ntBASIC32.08■■■□□ 2.73
RFX7Q2KHR2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.07■■■□□ 2.73
RFX7Q2KHR2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.06■■■□□ 2.72
RFX7Q2KHR2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
RFX7Q2KHR2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RFX7Q2KHR2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RFX7Q2KHR2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.05■■■□□ 2.72
RFX7Q2KHR2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RFX7Q2KHR2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.03■■■□□ 2.72
RFX7Q2KHR2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
RFX7Q2KHR2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.03■■■□□ 2.72
RFX7Q2KHR2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RFX7Q2KHR2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
RFX7Q2KHR2 ST7-AS1-201ENST00000456775 1889 ntBASIC32.02■■■□□ 2.72
RFX7Q2KHR2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.02■■■□□ 2.72
RFX7Q2KHR2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32■■■□□ 2.71
RFX7Q2KHR2 MIR6090-201ENST00000622481 60 ntBASIC32■■■□□ 2.71
RFX7Q2KHR2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
RFX7Q2KHR2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
RFX7Q2KHR2 AC021231.2-201ENST00000594613 730 ntBASIC31.98■■■□□ 2.71
RFX7Q2KHR2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
RFX7Q2KHR2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RFX7Q2KHR2 DUX4L29-201ENST00000425409 679 ntBASIC31.95■■■□□ 2.71
RFX7Q2KHR2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
RFX7Q2KHR2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
RFX7Q2KHR2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 AC010864.1-201ENST00000609407 1511 ntBASIC31.94■■■□□ 2.7
RFX7Q2KHR2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.93■■■□□ 2.7
RFX7Q2KHR2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RFX7Q2KHR2 AC108673.1-201ENST00000510422 1159 ntBASIC31.93■■■□□ 2.7
RFX7Q2KHR2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RFX7Q2KHR2 HLA-V-202ENST00000446817 847 ntBASIC31.92■■■□□ 2.7
RFX7Q2KHR2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RFX7Q2KHR2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RFX7Q2KHR2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
RFX7Q2KHR2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
RFX7Q2KHR2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RFX7Q2KHR2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RFX7Q2KHR2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
RFX7Q2KHR2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RFX7Q2KHR2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
RFX7Q2KHR2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
RFX7Q2KHR2 ABCB10P1-201ENST00000614297 2181 ntBASIC31.86■■■□□ 2.69
RFX7Q2KHR2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
RFX7Q2KHR2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RFX7Q2KHR2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.85■■■□□ 2.69
RFX7Q2KHR2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.84■■■□□ 2.69
RFX7Q2KHR2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
RFX7Q2KHR2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
RFX7Q2KHR2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RFX7Q2KHR2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.83■■■□□ 2.69
RFX7Q2KHR2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RFX7Q2KHR2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
RFX7Q2KHR2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
RFX7Q2KHR2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.69
RFX7Q2KHR2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.82■■■□□ 2.68
RFX7Q2KHR2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.82■■■□□ 2.68
RFX7Q2KHR2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
RFX7Q2KHR2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
RFX7Q2KHR2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.81■■■□□ 2.68
RFX7Q2KHR2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.81■■■□□ 2.68
RFX7Q2KHR2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RFX7Q2KHR2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.79■■■□□ 2.68
RFX7Q2KHR2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
RFX7Q2KHR2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.78■■■□□ 2.68
RFX7Q2KHR2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms