Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RSPO4Q2I0M5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RSPO4Q2I0M5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.23■■□□□ 1.79
RSPO4Q2I0M5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.23■■□□□ 1.79
RSPO4Q2I0M5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RSPO4Q2I0M5 AL033527.3-201ENST00000566366 1196 ntBASIC26.22■■□□□ 1.79
RSPO4Q2I0M5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
RSPO4Q2I0M5 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.21■■□□□ 1.79
RSPO4Q2I0M5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RSPO4Q2I0M5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.2■■□□□ 1.79
RSPO4Q2I0M5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RSPO4Q2I0M5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RSPO4Q2I0M5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RSPO4Q2I0M5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.2■■□□□ 1.78
RSPO4Q2I0M5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.2■■□□□ 1.78
RSPO4Q2I0M5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RSPO4Q2I0M5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.19■■□□□ 1.78
RSPO4Q2I0M5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RSPO4Q2I0M5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
RSPO4Q2I0M5 AC008813.1-201ENST00000536597 885 ntBASIC26.18■■□□□ 1.78
RSPO4Q2I0M5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RSPO4Q2I0M5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RSPO4Q2I0M5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
RSPO4Q2I0M5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RSPO4Q2I0M5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.16■■□□□ 1.78
RSPO4Q2I0M5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
RSPO4Q2I0M5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RSPO4Q2I0M5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RSPO4Q2I0M5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
RSPO4Q2I0M5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RSPO4Q2I0M5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
RSPO4Q2I0M5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.12■■□□□ 1.77
RSPO4Q2I0M5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RSPO4Q2I0M5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
RSPO4Q2I0M5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
RSPO4Q2I0M5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.1■■□□□ 1.77
RSPO4Q2I0M5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RSPO4Q2I0M5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RSPO4Q2I0M5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
RSPO4Q2I0M5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RSPO4Q2I0M5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RSPO4Q2I0M5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
RSPO4Q2I0M5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RSPO4Q2I0M5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.05■■□□□ 1.76
RSPO4Q2I0M5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.05■■□□□ 1.76
RSPO4Q2I0M5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RSPO4Q2I0M5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RSPO4Q2I0M5 AC019069.1-201ENST00000610008 1333 ntBASIC26.04■■□□□ 1.76
RSPO4Q2I0M5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 AC022413.1-201ENST00000624602 984 ntBASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RSPO4Q2I0M5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RSPO4Q2I0M5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RSPO4Q2I0M5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.01■■□□□ 1.75
RSPO4Q2I0M5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26■■□□□ 1.75
RSPO4Q2I0M5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.99■■□□□ 1.75
RSPO4Q2I0M5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RSPO4Q2I0M5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.98■■□□□ 1.75
RSPO4Q2I0M5 RARRES2P1-201ENST00000474487 481 ntBASIC25.97■■□□□ 1.75
RSPO4Q2I0M5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.97■■□□□ 1.75
RSPO4Q2I0M5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RSPO4Q2I0M5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.95■■□□□ 1.74
RSPO4Q2I0M5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RSPO4Q2I0M5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RSPO4Q2I0M5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RSPO4Q2I0M5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RSPO4Q2I0M5 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.92■■□□□ 1.74
RSPO4Q2I0M5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.91■■□□□ 1.74
RSPO4Q2I0M5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RSPO4Q2I0M5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.9■■□□□ 1.74
RSPO4Q2I0M5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RSPO4Q2I0M5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RSPO4Q2I0M5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 AL592295.1-201ENST00000400984 884 ntBASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 U85056.1-201ENST00000616429 682 ntBASIC25.89■■□□□ 1.74
RSPO4Q2I0M5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.88■■□□□ 1.73
RSPO4Q2I0M5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RSPO4Q2I0M5 TSPY13P-201ENST00000338964 914 ntBASIC25.87■■□□□ 1.73
RSPO4Q2I0M5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RSPO4Q2I0M5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RSPO4Q2I0M5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.86■■□□□ 1.73
RSPO4Q2I0M5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.86■■□□□ 1.73
RSPO4Q2I0M5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RSPO4Q2I0M5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.84■■□□□ 1.73
RSPO4Q2I0M5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RSPO4Q2I0M5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.83■■□□□ 1.73
RSPO4Q2I0M5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RSPO4Q2I0M5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.83■■□□□ 1.73
RSPO4Q2I0M5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.81■■□□□ 1.72
RSPO4Q2I0M5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
RSPO4Q2I0M5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RSPO4Q2I0M5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms