Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 TIP1YBR067C 633 nt8.91□□□□□ -0.98
CLP1Q08685 GNP1YDR508C 1992 nt8.91□□□□□ -0.98
CLP1Q08685 SOL2YCR073W-A 948 nt8.9□□□□□ -0.98
CLP1Q08685 TMA23YMR269W 636 nt8.9□□□□□ -0.98
CLP1Q08685 SLG1YOR008C 1137 nt8.9□□□□□ -0.98
CLP1Q08685 FLR1YBR008C 1647 nt8.9□□□□□ -0.99
CLP1Q08685 DDI1YER143W 1287 nt8.89□□□□□ -0.99
CLP1Q08685 SPP2YOR148C 558 nt8.89□□□□□ -0.99
CLP1Q08685 YPS3YLR121C 1527 nt8.88□□□□□ -0.99
CLP1Q08685 MTO1YGL236C 2010 nt8.88□□□□□ -0.99
CLP1Q08685 FMS1YMR020W 1527 nt8.87□□□□□ -0.99
CLP1Q08685 YDR510C-AYDR510C-A 117 nt8.87□□□□□ -0.99
CLP1Q08685 VPS62YGR141W 1404 nt8.87□□□□□ -0.99
CLP1Q08685 ILV3YJR016C 1758 nt8.86□□□□□ -0.99
CLP1Q08685 APS2YJR058C 444 nt8.84□□□□□ -0.99
CLP1Q08685 THI6YPL214C 1623 nt8.83□□□□□ -1
CLP1Q08685 IMO32YGR031W 1029 nt8.83□□□□□ -1
CLP1Q08685 HXK1YFR053C 1458 nt8.83□□□□□ -1
CLP1Q08685 SPS100YHR139C 981 nt8.82□□□□□ -1
CLP1Q08685 ASP3-1YLR155C 1089 nt8.82□□□□□ -1
CLP1Q08685 ASP3-2YLR157C 1089 nt8.82□□□□□ -1
CLP1Q08685 ASP3-3YLR158C 1089 nt8.82□□□□□ -1
CLP1Q08685 ASP3-4YLR160C 1089 nt8.82□□□□□ -1
CLP1Q08685 MUP1YGR055W 1725 nt8.82□□□□□ -1
CLP1Q08685 RTG2YGL252C 1767 nt8.81□□□□□ -1
CLP1Q08685 HOL1YNR055C 1761 nt8.81□□□□□ -1
CLP1Q08685 ADE8YDR408C 645 nt8.8□□□□□ -1
CLP1Q08685 RIB1YBL033C 1038 nt8.79□□□□□ -1
CLP1Q08685 SFL1YOR140W 2301 nt8.79□□□□□ -1
CLP1Q08685 IGD1YFR017C 588 nt8.78□□□□□ -1
CLP1Q08685 NIF3YGL221C 867 nt8.78□□□□□ -1
CLP1Q08685 YCR025CYCR025C 411 nt8.77□□□□□ -1.01
CLP1Q08685 YDL086WYDL086W 822 nt8.77□□□□□ -1.01
CLP1Q08685 HEM13YDR044W 987 nt8.77□□□□□ -1.01
CLP1Q08685 SNU66YOR308C 1764 nt8.76□□□□□ -1.01
CLP1Q08685 SOD2YHR008C 702 nt8.76□□□□□ -1.01
CLP1Q08685 YIA6YIL006W 1122 nt8.76□□□□□ -1.01
CLP1Q08685 YHL008CYHL008C 1884 nt8.76□□□□□ -1.01
CLP1Q08685 ABZ2YMR289W 1125 nt8.75□□□□□ -1.01
CLP1Q08685 GCD11YER025W 1584 nt8.74□□□□□ -1.01
CLP1Q08685 ALD5YER073W 1563 nt8.74□□□□□ -1.01
CLP1Q08685 YOR325WYOR325W 474 nt8.74□□□□□ -1.01
CLP1Q08685 ENO2YHR174W 1314 nt8.74□□□□□ -1.01
CLP1Q08685 ADE2YOR128C 1716 nt8.74□□□□□ -1.01
CLP1Q08685 YFR036W-AYFR036W-A 651 nt8.73□□□□□ -1.01
CLP1Q08685 RRT8YOL048C 1029 nt8.73□□□□□ -1.01
CLP1Q08685 SPE2YOL052C 1191 nt8.73□□□□□ -1.01
CLP1Q08685 ERG13YML126C 1476 nt8.72□□□□□ -1.01
CLP1Q08685 TAT2YOL020W 1779 nt8.72□□□□□ -1.01
CLP1Q08685 YCP4YCR004C 744 nt8.72□□□□□ -1.01
CLP1Q08685 YJR114WYJR114W 393 nt8.71□□□□□ -1.02
CLP1Q08685 YDR455CYDR455C 309 nt8.7□□□□□ -1.02
CLP1Q08685 IPL1YPL209C 1104 nt8.7□□□□□ -1.02
CLP1Q08685 ALR1YOL130W 2580 nt8.69□□□□□ -1.02
CLP1Q08685 DUR3YHL016C 2208 nt8.69□□□□□ -1.02
CLP1Q08685 TVP23YDR084C 600 nt8.69□□□□□ -1.02
CLP1Q08685 YIL100C-AYIL100C-A 339 nt8.69□□□□□ -1.02
CLP1Q08685 ERG6YML008C 1152 nt8.69□□□□□ -1.02
CLP1Q08685 tA(AGC)DtA(AGC)D 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)FtA(AGC)F 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)GtA(AGC)G 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)HtA(AGC)H 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)JtA(AGC)J 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)K1tA(AGC)K1 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)K2tA(AGC)K2 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)LtA(AGC)L 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)M1tA(AGC)M1 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)M2tA(AGC)M2 73 nt8.68□□□□□ -1.02
CLP1Q08685 tA(AGC)PtA(AGC)P 73 nt8.68□□□□□ -1.02
CLP1Q08685 SAM50YNL026W 1455 nt8.68□□□□□ -1.02
CLP1Q08685 ACH1YBL015W 1581 nt8.68□□□□□ -1.02
CLP1Q08685 YDR306CYDR306C 1437 nt8.65□□□□□ -1.02
CLP1Q08685 AIM1YAL046C 357 nt8.65□□□□□ -1.02
CLP1Q08685 ENT4YLL038C 744 nt8.64□□□□□ -1.03
CLP1Q08685 OPI10YOL032W 741 nt8.64□□□□□ -1.03
CLP1Q08685 THP3YPR045C 1413 nt8.63□□□□□ -1.03
CLP1Q08685 MAM3YOL060C 2121 nt8.62□□□□□ -1.03
CLP1Q08685 MOB1YIL106W 945 nt8.62□□□□□ -1.03
CLP1Q08685 CCT2YIL142W 1584 nt8.61□□□□□ -1.03
CLP1Q08685 COQ8YGL119W 1506 nt8.61□□□□□ -1.03
CLP1Q08685 AMF1YOR378W 1548 nt8.61□□□□□ -1.03
CLP1Q08685 TPC1YGR096W 945 nt8.61□□□□□ -1.03
CLP1Q08685 NAS2YIL007C 663 nt8.61□□□□□ -1.03
CLP1Q08685 FLX1YIL134W 936 nt8.6□□□□□ -1.03
CLP1Q08685 FSH2YMR222C 672 nt8.6□□□□□ -1.03
CLP1Q08685 ARO8YGL202W 1503 nt8.59□□□□□ -1.03
CLP1Q08685 OPI3YJR073C 621 nt8.59□□□□□ -1.03
CLP1Q08685 YLR046CYLR046C 813 nt8.58□□□□□ -1.04
CLP1Q08685 RCR1YBR005W 642 nt8.58□□□□□ -1.04
CLP1Q08685 BET2YPR176C 978 nt8.58□□□□□ -1.04
CLP1Q08685 UGP1YKL035W 1500 nt8.58□□□□□ -1.04
CLP1Q08685 CYC3YAL039C 810 nt8.57□□□□□ -1.04
CLP1Q08685 YKR012CYKR012C 378 nt8.57□□□□□ -1.04
CLP1Q08685 LEU2YCL018W 1095 nt8.57□□□□□ -1.04
CLP1Q08685 ECM10YEL030W 1935 nt8.56□□□□□ -1.04
CLP1Q08685 LYS20YDL182W 1287 nt8.56□□□□□ -1.04
CLP1Q08685 ADH3YMR083W 1128 nt8.56□□□□□ -1.04
CLP1Q08685 LSB6YJL100W 1824 nt8.56□□□□□ -1.04
CLP1Q08685 MDL2YPL270W 2322 nt8.55□□□□□ -1.04
CLP1Q08685 HIS2YFR025C 1008 nt8.55□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 135.7 ms