Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hist1h3bP84228 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hist1h3bP84228 Gm9397-201ENSMUST00000200125 605 ntBASIC21.33■■□□□ 1.01
Hist1h3bP84228 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hist1h3bP84228 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Hist1h3bP84228 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.32■■□□□ 1
Hist1h3bP84228 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h3bP84228 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Hist1h3bP84228 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h3bP84228 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h3bP84228 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.3■■□□□ 1
Hist1h3bP84228 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hist1h3bP84228 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.29■■□□□ 1
Hist1h3bP84228 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hist1h3bP84228 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Hist1h3bP84228 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hist1h3bP84228 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hist1h3bP84228 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist1h3bP84228 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hist1h3bP84228 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.28■■□□□ 1
Hist1h3bP84228 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hist1h3bP84228 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.26■□□□□ 0.99
Hist1h3bP84228 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hist1h3bP84228 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h3bP84228 Gm24970-201ENSMUST00000175582 82 ntBASIC21.25■□□□□ 0.99
Hist1h3bP84228 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.25■□□□□ 0.99
Hist1h3bP84228 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.25■□□□□ 0.99
Hist1h3bP84228 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.25■□□□□ 0.99
Hist1h3bP84228 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h3bP84228 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.24■□□□□ 0.99
Hist1h3bP84228 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h3bP84228 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h3bP84228 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.23■□□□□ 0.99
Hist1h3bP84228 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h3bP84228 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.22■□□□□ 0.99
Hist1h3bP84228 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Hist1h3bP84228 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hist1h3bP84228 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.21■□□□□ 0.99
Hist1h3bP84228 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.21■□□□□ 0.99
Hist1h3bP84228 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.2■□□□□ 0.99
Hist1h3bP84228 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Hist1h3bP84228 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Hist1h3bP84228 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hist1h3bP84228 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h3bP84228 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h3bP84228 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.19■□□□□ 0.98
Hist1h3bP84228 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hist1h3bP84228 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hist1h3bP84228 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hist1h3bP84228 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h3bP84228 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Hist1h3bP84228 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hist1h3bP84228 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hist1h3bP84228 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hist1h3bP84228 Gm45855-201ENSMUST00000212546 880 ntBASIC21.14■□□□□ 0.97
Hist1h3bP84228 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hist1h3bP84228 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h3bP84228 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hist1h3bP84228 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hist1h3bP84228 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h3bP84228 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h3bP84228 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h3bP84228 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h3bP84228 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.11■□□□□ 0.97
Hist1h3bP84228 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h3bP84228 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Hist1h3bP84228 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hist1h3bP84228 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hist1h3bP84228 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.09■□□□□ 0.97
Hist1h3bP84228 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hist1h3bP84228 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.07■□□□□ 0.96
Hist1h3bP84228 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h3bP84228 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h3bP84228 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h3bP84228 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h3bP84228 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Hist1h3bP84228 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hist1h3bP84228 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.04■□□□□ 0.96
Hist1h3bP84228 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h3bP84228 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h3bP84228 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h3bP84228 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h3bP84228 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h3bP84228 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h3bP84228 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
Hist1h3bP84228 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hist1h3bP84228 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hist1h3bP84228 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hist1h3bP84228 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hist1h3bP84228 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h3bP84228 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h3bP84228 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hist1h3bP84228 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h3bP84228 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h3bP84228 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h3bP84228 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h3bP84228 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h3bP84228 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h3bP84228 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h3bP84228 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms