Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CNTNAP1P78357 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.04■■■□□ 2.72
CNTNAP1P78357 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CNTNAP1P78357 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.03■■■□□ 2.72
CNTNAP1P78357 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.03■■■□□ 2.72
CNTNAP1P78357 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.03■■■□□ 2.72
CNTNAP1P78357 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.02■■■□□ 2.72
CNTNAP1P78357 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
CNTNAP1P78357 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
CNTNAP1P78357 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CNTNAP1P78357 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.99■■■□□ 2.71
CNTNAP1P78357 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
CNTNAP1P78357 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CNTNAP1P78357 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.98■■■□□ 2.71
CNTNAP1P78357 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CNTNAP1P78357 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.98■■■□□ 2.71
CNTNAP1P78357 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CNTNAP1P78357 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.97■■■□□ 2.71
CNTNAP1P78357 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CNTNAP1P78357 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CNTNAP1P78357 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
CNTNAP1P78357 AC012354.3-201ENST00000623734 483 ntBASIC31.95■■■□□ 2.71
CNTNAP1P78357 RNF126P1-201ENST00000567452 1320 ntBASIC31.95■■■□□ 2.71
CNTNAP1P78357 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CNTNAP1P78357 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CNTNAP1P78357 GPX1-201ENST00000419349 1106 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 DUX4L13-201ENST00000554103 1267 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 DUX4L15-201ENST00000611059 1267 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 DUX4L23-201ENST00000615195 1269 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 DUX4L24-201ENST00000617576 1269 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 DUX4L22-201ENST00000618238 1269 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 DUX4L20-201ENST00000619712 1269 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 DUX4L21-201ENST00000622058 1269 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 DUX4L10-201ENST00000622460 1267 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 DUX4L25-201ENST00000624915 1269 ntBASIC31.94■■■□□ 2.7
CNTNAP1P78357 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CNTNAP1P78357 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CNTNAP1P78357 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.93■■■□□ 2.7
CNTNAP1P78357 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CNTNAP1P78357 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CNTNAP1P78357 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.9■■■□□ 2.7
CNTNAP1P78357 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CNTNAP1P78357 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.89■■■□□ 2.7
CNTNAP1P78357 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
CNTNAP1P78357 NTF6A-201ENST00000591175 560 ntBASIC31.88■■■□□ 2.69
CNTNAP1P78357 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CNTNAP1P78357 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CNTNAP1P78357 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
CNTNAP1P78357 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CNTNAP1P78357 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.85■■■□□ 2.69
CNTNAP1P78357 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CNTNAP1P78357 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CNTNAP1P78357 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CNTNAP1P78357 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CNTNAP1P78357 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CNTNAP1P78357 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
CNTNAP1P78357 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CNTNAP1P78357 AC120057.4-201ENST00000624722 1615 ntBASIC31.81■■■□□ 2.68
CNTNAP1P78357 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CNTNAP1P78357 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
CNTNAP1P78357 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.8■■■□□ 2.68
CNTNAP1P78357 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.79■■■□□ 2.68
CNTNAP1P78357 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
CNTNAP1P78357 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CNTNAP1P78357 AC018358.1-201ENST00000631079 1402 ntBASIC31.78■■■□□ 2.68
CNTNAP1P78357 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
CNTNAP1P78357 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
CNTNAP1P78357 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
CNTNAP1P78357 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.75■■■□□ 2.67
CNTNAP1P78357 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CNTNAP1P78357 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
CNTNAP1P78357 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CNTNAP1P78357 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CNTNAP1P78357 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
CNTNAP1P78357 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.72■■■□□ 2.67
CNTNAP1P78357 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CNTNAP1P78357 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CNTNAP1P78357 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CNTNAP1P78357 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CNTNAP1P78357 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.71■■■□□ 2.67
CNTNAP1P78357 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CNTNAP1P78357 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CNTNAP1P78357 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.7■■■□□ 2.67
CNTNAP1P78357 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
CNTNAP1P78357 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
CNTNAP1P78357 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CNTNAP1P78357 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.68■■■□□ 2.66
CNTNAP1P78357 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.68■■■□□ 2.66
CNTNAP1P78357 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms