Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB11AP62491 AL031258.1-201ENST00000623562 325 ntBASIC21.11■□□□□ 0.97
RAB11AP62491 AC135731.1-201ENST00000569415 2548 ntBASIC21.11■□□□□ 0.97
RAB11AP62491 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB11AP62491 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB11AP62491 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB11AP62491 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB11AP62491 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB11AP62491 AC142086.6-201ENST00000621154 1765 ntBASIC21.09■□□□□ 0.97
RAB11AP62491 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB11AP62491 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB11AP62491 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAB11AP62491 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.07■□□□□ 0.96
RAB11AP62491 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RAB11AP62491 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB11AP62491 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB11AP62491 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.06■□□□□ 0.96
RAB11AP62491 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB11AP62491 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB11AP62491 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.05■□□□□ 0.96
RAB11AP62491 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB11AP62491 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB11AP62491 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB11AP62491 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB11AP62491 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB11AP62491 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.04■□□□□ 0.96
RAB11AP62491 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB11AP62491 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB11AP62491 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB11AP62491 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB11AP62491 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RAB11AP62491 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.02■□□□□ 0.96
RAB11AP62491 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB11AP62491 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.01■□□□□ 0.95
RAB11AP62491 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB11AP62491 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB11AP62491 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RAB11AP62491 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB11AP62491 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21■□□□□ 0.95
RAB11AP62491 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB11AP62491 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB11AP62491 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB11AP62491 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB11AP62491 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB11AP62491 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB11AP62491 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB11AP62491 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB11AP62491 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB11AP62491 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB11AP62491 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB11AP62491 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB11AP62491 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB11AP62491 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB11AP62491 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB11AP62491 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RAB11AP62491 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB11AP62491 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB11AP62491 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB11AP62491 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB11AP62491 AP002365.1-201ENST00000603448 772 ntBASIC20.94■□□□□ 0.94
RAB11AP62491 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.94■□□□□ 0.94
RAB11AP62491 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB11AP62491 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB11AP62491 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB11AP62491 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB11AP62491 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11AP62491 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11AP62491 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11AP62491 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11AP62491 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11AP62491 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.91■□□□□ 0.94
RAB11AP62491 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11AP62491 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB11AP62491 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11AP62491 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11AP62491 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
RAB11AP62491 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAB11AP62491 AL139393.2-201ENST00000608721 2025 ntBASIC20.9■□□□□ 0.94
RAB11AP62491 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RAB11AP62491 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11AP62491 WASH5P-204ENST00000632292 975 ntBASIC20.89■□□□□ 0.93
RAB11AP62491 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11AP62491 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11AP62491 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11AP62491 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11AP62491 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11AP62491 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB11AP62491 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB11AP62491 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11AP62491 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RAB11AP62491 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11AP62491 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11AP62491 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11AP62491 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.87■□□□□ 0.93
RAB11AP62491 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB11AP62491 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11AP62491 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11AP62491 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB11AP62491 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB11AP62491 AL121749.1-202ENST00000609313 2153 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms