Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lmo4P61969 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lmo4P61969 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Lmo4P61969 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.14■□□□□ 0.81
Lmo4P61969 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lmo4P61969 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lmo4P61969 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lmo4P61969 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmo4P61969 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lmo4P61969 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lmo4P61969 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.1■□□□□ 0.81
Lmo4P61969 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lmo4P61969 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.09■□□□□ 0.81
Lmo4P61969 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lmo4P61969 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Lmo4P61969 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lmo4P61969 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lmo4P61969 Gm7432-201ENSMUST00000210343 879 ntBASIC20.07■□□□□ 0.8
Lmo4P61969 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lmo4P61969 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lmo4P61969 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.06■□□□□ 0.8
Lmo4P61969 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lmo4P61969 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lmo4P61969 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lmo4P61969 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lmo4P61969 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Lmo4P61969 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lmo4P61969 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Lmo4P61969 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lmo4P61969 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lmo4P61969 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lmo4P61969 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lmo4P61969 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20■□□□□ 0.79
Lmo4P61969 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmo4P61969 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lmo4P61969 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmo4P61969 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.99■□□□□ 0.79
Lmo4P61969 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmo4P61969 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lmo4P61969 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lmo4P61969 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lmo4P61969 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Lmo4P61969 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Lmo4P61969 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.97■□□□□ 0.79
Lmo4P61969 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.97■□□□□ 0.79
Lmo4P61969 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lmo4P61969 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lmo4P61969 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lmo4P61969 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.95■□□□□ 0.79
Lmo4P61969 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lmo4P61969 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lmo4P61969 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lmo4P61969 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.94■□□□□ 0.78
Lmo4P61969 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lmo4P61969 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lmo4P61969 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.93■□□□□ 0.78
Lmo4P61969 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lmo4P61969 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lmo4P61969 Gm11599-201ENSMUST00000118720 878 ntBASIC19.92■□□□□ 0.78
Lmo4P61969 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.92■□□□□ 0.78
Lmo4P61969 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.92■□□□□ 0.78
Lmo4P61969 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lmo4P61969 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.92■□□□□ 0.78
Lmo4P61969 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lmo4P61969 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.91■□□□□ 0.78
Lmo4P61969 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lmo4P61969 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.91■□□□□ 0.78
Lmo4P61969 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.91■□□□□ 0.78
Lmo4P61969 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lmo4P61969 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmo4P61969 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.9■□□□□ 0.78
Lmo4P61969 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmo4P61969 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lmo4P61969 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lmo4P61969 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Lmo4P61969 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lmo4P61969 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lmo4P61969 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lmo4P61969 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lmo4P61969 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lmo4P61969 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
Lmo4P61969 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lmo4P61969 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lmo4P61969 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Lmo4P61969 Gm30023-201ENSMUST00000197970 889 ntBASIC19.84■□□□□ 0.77
Lmo4P61969 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lmo4P61969 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lmo4P61969 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lmo4P61969 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmo4P61969 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.82■□□□□ 0.76
Lmo4P61969 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lmo4P61969 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmo4P61969 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lmo4P61969 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lmo4P61969 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.82■□□□□ 0.76
Lmo4P61969 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lmo4P61969 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.81■□□□□ 0.76
Lmo4P61969 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lmo4P61969 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lmo4P61969 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms