Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOC4P55056 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APOC4P55056 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
APOC4P55056 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.32■□□□□ 0.68
APOC4P55056 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
APOC4P55056 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOC4P55056 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOC4P55056 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
APOC4P55056 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APOC4P55056 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOC4P55056 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOC4P55056 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOC4P55056 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.31■□□□□ 0.68
APOC4P55056 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.3■□□□□ 0.68
APOC4P55056 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APOC4P55056 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APOC4P55056 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC4P55056 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
APOC4P55056 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.29■□□□□ 0.68
APOC4P55056 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC4P55056 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC4P55056 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APOC4P55056 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.28■□□□□ 0.68
APOC4P55056 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.28■□□□□ 0.68
APOC4P55056 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APOC4P55056 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.26■□□□□ 0.67
APOC4P55056 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOC4P55056 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
APOC4P55056 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC4P55056 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.24■□□□□ 0.67
APOC4P55056 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOC4P55056 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
APOC4P55056 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.24■□□□□ 0.67
APOC4P55056 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOC4P55056 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.23■□□□□ 0.67
APOC4P55056 AC010864.1-201ENST00000609407 1511 ntBASIC19.23■□□□□ 0.67
APOC4P55056 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC4P55056 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.22■□□□□ 0.67
APOC4P55056 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC4P55056 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.21■□□□□ 0.67
APOC4P55056 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC4P55056 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC4P55056 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
APOC4P55056 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
APOC4P55056 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.2■□□□□ 0.66
APOC4P55056 LINC01971-201ENST00000617888 1048 ntBASIC19.2■□□□□ 0.66
APOC4P55056 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOC4P55056 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOC4P55056 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOC4P55056 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOC4P55056 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOC4P55056 HLA-V-202ENST00000446817 847 ntBASIC19.19■□□□□ 0.66
APOC4P55056 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APOC4P55056 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOC4P55056 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
APOC4P55056 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOC4P55056 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
APOC4P55056 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOC4P55056 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOC4P55056 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.16■□□□□ 0.66
APOC4P55056 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APOC4P55056 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APOC4P55056 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.15■□□□□ 0.66
APOC4P55056 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC4P55056 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.15■□□□□ 0.66
APOC4P55056 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.14■□□□□ 0.65
APOC4P55056 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.14■□□□□ 0.65
APOC4P55056 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
APOC4P55056 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.13■□□□□ 0.65
APOC4P55056 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOC4P55056 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.12■□□□□ 0.65
APOC4P55056 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.12■□□□□ 0.65
APOC4P55056 DUX4L11-201ENST00000611504 1267 ntBASIC19.12■□□□□ 0.65
APOC4P55056 DUX4L12-201ENST00000614593 1267 ntBASIC19.12■□□□□ 0.65
APOC4P55056 DUX4L14-201ENST00000621227 1267 ntBASIC19.12■□□□□ 0.65
APOC4P55056 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
APOC4P55056 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOC4P55056 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
APOC4P55056 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.11■□□□□ 0.65
APOC4P55056 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.11■□□□□ 0.65
APOC4P55056 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.11■□□□□ 0.65
APOC4P55056 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.11■□□□□ 0.65
APOC4P55056 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.11■□□□□ 0.65
APOC4P55056 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
APOC4P55056 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOC4P55056 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
APOC4P55056 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.1■□□□□ 0.65
APOC4P55056 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
APOC4P55056 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
APOC4P55056 AL135925.1-201ENST00000605920 1701 ntBASIC19.09■□□□□ 0.65
APOC4P55056 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
APOC4P55056 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.09■□□□□ 0.65
APOC4P55056 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.08■□□□□ 0.65
APOC4P55056 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
APOC4P55056 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
APOC4P55056 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
APOC4P55056 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
APOC4P55056 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.06■□□□□ 0.64
APOC4P55056 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APOC4P55056 LINC00273-201ENST00000539813 1452 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms