Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sox18P43680 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.58■■□□□ 1.37
Sox18P43680 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Sox18P43680 Gm6311-201ENSMUST00000073790 878 ntBASIC23.58■■□□□ 1.37
Sox18P43680 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox18P43680 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox18P43680 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox18P43680 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.57■■□□□ 1.36
Sox18P43680 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox18P43680 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Sox18P43680 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Sox18P43680 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox18P43680 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox18P43680 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Sox18P43680 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox18P43680 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox18P43680 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox18P43680 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox18P43680 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.54■■□□□ 1.36
Sox18P43680 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Sox18P43680 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox18P43680 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox18P43680 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox18P43680 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sox18P43680 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sox18P43680 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.51■■□□□ 1.35
Sox18P43680 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sox18P43680 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.5■■□□□ 1.35
Sox18P43680 Gm15039-201ENSMUST00000118914 875 ntBASIC23.5■■□□□ 1.35
Sox18P43680 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.5■■□□□ 1.35
Sox18P43680 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.49■■□□□ 1.35
Sox18P43680 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sox18P43680 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.48■■□□□ 1.35
Sox18P43680 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.48■■□□□ 1.35
Sox18P43680 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.48■■□□□ 1.35
Sox18P43680 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Sox18P43680 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sox18P43680 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.45■■□□□ 1.34
Sox18P43680 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sox18P43680 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Sox18P43680 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Sox18P43680 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sox18P43680 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Sox18P43680 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Sox18P43680 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.4■■□□□ 1.34
Sox18P43680 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sox18P43680 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Sox18P43680 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sox18P43680 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sox18P43680 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Sox18P43680 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Sox18P43680 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Sox18P43680 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sox18P43680 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sox18P43680 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sox18P43680 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sox18P43680 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Sox18P43680 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sox18P43680 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.37■■□□□ 1.33
Sox18P43680 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.37■■□□□ 1.33
Sox18P43680 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.36■■□□□ 1.33
Sox18P43680 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sox18P43680 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.34■■□□□ 1.33
Sox18P43680 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.34■■□□□ 1.33
Sox18P43680 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sox18P43680 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sox18P43680 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Sox18P43680 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sox18P43680 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sox18P43680 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.32■■□□□ 1.32
Sox18P43680 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Sox18P43680 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sox18P43680 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.31■■□□□ 1.32
Sox18P43680 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.3■■□□□ 1.32
Sox18P43680 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sox18P43680 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sox18P43680 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sox18P43680 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sox18P43680 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sox18P43680 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sox18P43680 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sox18P43680 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.26■■□□□ 1.31
Sox18P43680 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.25■■□□□ 1.31
Sox18P43680 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.25■■□□□ 1.31
Sox18P43680 Gm12366-201ENSMUST00000121722 873 ntBASIC23.25■■□□□ 1.31
Sox18P43680 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.25■■□□□ 1.31
Sox18P43680 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.25■■□□□ 1.31
Sox18P43680 Gm5786-201ENSMUST00000085368 882 ntBASIC23.25■■□□□ 1.31
Sox18P43680 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sox18P43680 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sox18P43680 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sox18P43680 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sox18P43680 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.21■■□□□ 1.31
Sox18P43680 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sox18P43680 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.21■■□□□ 1.31
Sox18P43680 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sox18P43680 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sox18P43680 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sox18P43680 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sox18P43680 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms