Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd27P41272 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cd27P41272 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd27P41272 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.76■□□□□ 0.75
Cd27P41272 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd27P41272 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd27P41272 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cd27P41272 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd27P41272 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd27P41272 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cd27P41272 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd27P41272 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd27P41272 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd27P41272 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cd27P41272 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cd27P41272 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.7■□□□□ 0.74
Cd27P41272 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cd27P41272 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cd27P41272 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.7■□□□□ 0.74
Cd27P41272 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.69■□□□□ 0.74
Cd27P41272 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cd27P41272 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cd27P41272 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd27P41272 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Cd27P41272 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd27P41272 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd27P41272 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd27P41272 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd27P41272 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd27P41272 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd27P41272 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd27P41272 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cd27P41272 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd27P41272 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.65■□□□□ 0.74
Cd27P41272 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd27P41272 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.65■□□□□ 0.74
Cd27P41272 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd27P41272 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.62■□□□□ 0.73
Cd27P41272 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd27P41272 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd27P41272 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd27P41272 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd27P41272 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cd27P41272 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.61■□□□□ 0.73
Cd27P41272 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd27P41272 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd27P41272 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Cd27P41272 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.6■□□□□ 0.73
Cd27P41272 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd27P41272 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd27P41272 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.58■□□□□ 0.72
Cd27P41272 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cd27P41272 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.58■□□□□ 0.72
Cd27P41272 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd27P41272 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd27P41272 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cd27P41272 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.57■□□□□ 0.72
Cd27P41272 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Cd27P41272 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cd27P41272 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cd27P41272 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd27P41272 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd27P41272 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd27P41272 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd27P41272 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Cd27P41272 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cd27P41272 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cd27P41272 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd27P41272 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd27P41272 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd27P41272 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd27P41272 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd27P41272 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.5■□□□□ 0.71
Cd27P41272 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Cd27P41272 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd27P41272 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cd27P41272 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cd27P41272 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.48■□□□□ 0.71
Cd27P41272 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd27P41272 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd27P41272 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd27P41272 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd27P41272 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd27P41272 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd27P41272 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd27P41272 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Cd27P41272 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd27P41272 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd27P41272 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd27P41272 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd27P41272 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd27P41272 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.41■□□□□ 0.7
Cd27P41272 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd27P41272 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd27P41272 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd27P41272 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd27P41272 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd27P41272 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd27P41272 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd27P41272 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms