Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CDKN1AP38936 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.54■■□□□ 1.2
CDKN1AP38936 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKN1AP38936 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.52■■□□□ 1.2
CDKN1AP38936 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKN1AP38936 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDKN1AP38936 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.51■■□□□ 1.19
CDKN1AP38936 CR559946.2-201ENST00000623684 991 ntBASIC22.51■■□□□ 1.19
CDKN1AP38936 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.49■■□□□ 1.19
CDKN1AP38936 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.49■■□□□ 1.19
CDKN1AP38936 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CDKN1AP38936 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDKN1AP38936 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CDKN1AP38936 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDKN1AP38936 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.48■■□□□ 1.19
CDKN1AP38936 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDKN1AP38936 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CDKN1AP38936 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDKN1AP38936 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CDKN1AP38936 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.46■■□□□ 1.19
CDKN1AP38936 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.46■■□□□ 1.19
CDKN1AP38936 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKN1AP38936 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKN1AP38936 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKN1AP38936 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.43■■□□□ 1.18
CDKN1AP38936 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CDKN1AP38936 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.43■■□□□ 1.18
CDKN1AP38936 AL161658.1-201ENST00000623641 1967 ntBASIC22.42■■□□□ 1.18
CDKN1AP38936 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDKN1AP38936 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDKN1AP38936 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDKN1AP38936 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDKN1AP38936 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDKN1AP38936 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDKN1AP38936 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDKN1AP38936 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDKN1AP38936 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDKN1AP38936 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CDKN1AP38936 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.4■■□□□ 1.18
CDKN1AP38936 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.4■■□□□ 1.18
CDKN1AP38936 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDKN1AP38936 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDKN1AP38936 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDKN1AP38936 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDKN1AP38936 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDKN1AP38936 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDKN1AP38936 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDKN1AP38936 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDKN1AP38936 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDKN1AP38936 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDKN1AP38936 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDKN1AP38936 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.37■■□□□ 1.17
CDKN1AP38936 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CDKN1AP38936 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDKN1AP38936 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDKN1AP38936 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.37■■□□□ 1.17
CDKN1AP38936 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDKN1AP38936 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CDKN1AP38936 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.36■■□□□ 1.17
CDKN1AP38936 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.36■■□□□ 1.17
CDKN1AP38936 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.35■■□□□ 1.17
CDKN1AP38936 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDKN1AP38936 DUX4L13-201ENST00000554103 1267 ntBASIC22.34■■□□□ 1.17
CDKN1AP38936 DUX4L15-201ENST00000611059 1267 ntBASIC22.34■■□□□ 1.17
CDKN1AP38936 DUX4L23-201ENST00000615195 1269 ntBASIC22.34■■□□□ 1.17
CDKN1AP38936 DUX4L24-201ENST00000617576 1269 ntBASIC22.34■■□□□ 1.17
CDKN1AP38936 DUX4L22-201ENST00000618238 1269 ntBASIC22.34■■□□□ 1.17
CDKN1AP38936 DUX4L20-201ENST00000619712 1269 ntBASIC22.34■■□□□ 1.17
CDKN1AP38936 DUX4L21-201ENST00000622058 1269 ntBASIC22.34■■□□□ 1.17
CDKN1AP38936 DUX4L10-201ENST00000622460 1267 ntBASIC22.34■■□□□ 1.17
CDKN1AP38936 DUX4L25-201ENST00000624915 1269 ntBASIC22.34■■□□□ 1.17
CDKN1AP38936 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDKN1AP38936 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDKN1AP38936 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.33■■□□□ 1.17
CDKN1AP38936 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDKN1AP38936 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.32■■□□□ 1.16
CDKN1AP38936 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.32■■□□□ 1.16
CDKN1AP38936 HSD17B1P1-201ENST00000590052 955 ntBASIC22.32■■□□□ 1.16
CDKN1AP38936 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDKN1AP38936 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDKN1AP38936 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.31■■□□□ 1.16
CDKN1AP38936 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDKN1AP38936 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDKN1AP38936 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
CDKN1AP38936 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDKN1AP38936 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.3■■□□□ 1.16
CDKN1AP38936 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDKN1AP38936 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.29■■□□□ 1.16
CDKN1AP38936 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDKN1AP38936 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.29■■□□□ 1.16
CDKN1AP38936 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDKN1AP38936 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.28■■□□□ 1.16
CDKN1AP38936 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDKN1AP38936 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDKN1AP38936 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDKN1AP38936 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.26■■□□□ 1.15
CDKN1AP38936 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CDKN1AP38936 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDKN1AP38936 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDKN1AP38936 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms