Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 PUS7YOR243C 2031 nt10.66□□□□□ -0.7
SSF1P38789 DTR1YBR180W 1719 nt10.65□□□□□ -0.7
SSF1P38789 LCP5YER127W 1074 nt10.65□□□□□ -0.7
SSF1P38789 SEN2YLR105C 1134 nt10.64□□□□□ -0.71
SSF1P38789 YDR455CYDR455C 309 nt10.63□□□□□ -0.71
SSF1P38789 CCT2YIL142W 1584 nt10.61□□□□□ -0.71
SSF1P38789 SPT20YOL148C 1815 nt10.61□□□□□ -0.71
SSF1P38789 GSF2YML048W 1212 nt10.61□□□□□ -0.71
SSF1P38789 YOR325WYOR325W 474 nt10.61□□□□□ -0.71
SSF1P38789 YBR232CYBR232C 360 nt10.6□□□□□ -0.71
SSF1P38789 ADE8YDR408C 645 nt10.59□□□□□ -0.71
SSF1P38789 FTH1YBR207W 1398 nt10.59□□□□□ -0.71
SSF1P38789 ERG13YML126C 1476 nt10.59□□□□□ -0.71
SSF1P38789 ILV3YJR016C 1758 nt10.58□□□□□ -0.72
SSF1P38789 SPS100YHR139C 981 nt10.57□□□□□ -0.72
SSF1P38789 AIM1YAL046C 357 nt10.57□□□□□ -0.72
SSF1P38789 NAP1YKR048C 1254 nt10.56□□□□□ -0.72
SSF1P38789 RRT8YOL048C 1029 nt10.56□□□□□ -0.72
SSF1P38789 AI5_BETAQ0075 1065 nt10.55□□□□□ -0.72
SSF1P38789 YFR036W-AYFR036W-A 651 nt10.55□□□□□ -0.72
SSF1P38789 OPI10YOL032W 741 nt10.55□□□□□ -0.72
SSF1P38789 TUB4YLR212C 1422 nt10.54□□□□□ -0.72
SSF1P38789 CMP2YML057W 1815 nt10.54□□□□□ -0.72
SSF1P38789 APS2YJR058C 444 nt10.53□□□□□ -0.72
SSF1P38789 PAR32YDL173W 888 nt10.52□□□□□ -0.73
SSF1P38789 ILV2YMR108W 2064 nt10.51□□□□□ -0.73
SSF1P38789 MUP1YGR055W 1725 nt10.5□□□□□ -0.73
SSF1P38789 FAF1YIL019W 1041 nt10.5□□□□□ -0.73
SSF1P38789 YJR114WYJR114W 393 nt10.5□□□□□ -0.73
SSF1P38789 BET2YPR176C 978 nt10.5□□□□□ -0.73
SSF1P38789 YJL064WYJL064W 396 nt10.49□□□□□ -0.73
SSF1P38789 ENT4YLL038C 744 nt10.49□□□□□ -0.73
SSF1P38789 YLR122CYLR122C 378 nt10.49□□□□□ -0.73
SSF1P38789 NIF3YGL221C 867 nt10.48□□□□□ -0.73
SSF1P38789 YTH1YPR107C 627 nt10.48□□□□□ -0.73
SSF1P38789 DIG1YPL049C 1359 nt10.48□□□□□ -0.73
SSF1P38789 TVP23YDR084C 600 nt10.47□□□□□ -0.73
SSF1P38789 ARA2YMR041C 1008 nt10.47□□□□□ -0.73
SSF1P38789 ABZ2YMR289W 1125 nt10.47□□□□□ -0.73
SSF1P38789 KRE1YNL322C 942 nt10.47□□□□□ -0.73
SSF1P38789 YLR046CYLR046C 813 nt10.46□□□□□ -0.73
SSF1P38789 QDR2YIL121W 1629 nt10.45□□□□□ -0.74
SSF1P38789 TOM20YGR082W 552 nt10.45□□□□□ -0.74
SSF1P38789 LSB6YJL100W 1824 nt10.44□□□□□ -0.74
SSF1P38789 ENO2YHR174W 1314 nt10.43□□□□□ -0.74
SSF1P38789 PUP1YOR157C 786 nt10.43□□□□□ -0.74
SSF1P38789 REG2YBR050C 1017 nt10.43□□□□□ -0.74
SSF1P38789 OPI3YJR073C 621 nt10.42□□□□□ -0.74
SSF1P38789 PAU19YMR325W 375 nt10.42□□□□□ -0.74
SSF1P38789 SAC7YDR389W 1965 nt10.41□□□□□ -0.74
SSF1P38789 ARO8YGL202W 1503 nt10.4□□□□□ -0.74
SSF1P38789 IGD1YFR017C 588 nt10.38□□□□□ -0.75
SSF1P38789 YNR064CYNR064C 873 nt10.38□□□□□ -0.75
SSF1P38789 SPE2YOL052C 1191 nt10.37□□□□□ -0.75
SSF1P38789 GNP1YDR508C 1992 nt10.36□□□□□ -0.75
SSF1P38789 NPP1YCR026C 2229 nt10.36□□□□□ -0.75
SSF1P38789 KES1YPL145C 1305 nt10.34□□□□□ -0.75
SSF1P38789 COQ8YGL119W 1506 nt10.34□□□□□ -0.75
SSF1P38789 PUS5YLR165C 765 nt10.34□□□□□ -0.75
SSF1P38789 AMF1YOR378W 1548 nt10.33□□□□□ -0.76
SSF1P38789 TPC1YGR096W 945 nt10.33□□□□□ -0.76
SSF1P38789 FHN1YGR131W 525 nt10.32□□□□□ -0.76
SSF1P38789 NAS2YIL007C 663 nt10.32□□□□□ -0.76
SSF1P38789 ELO1YJL196C 933 nt10.32□□□□□ -0.76
SSF1P38789 TIP1YBR067C 633 nt10.32□□□□□ -0.76
SSF1P38789 HOL1YNR055C 1761 nt10.31□□□□□ -0.76
SSF1P38789 GID8YMR135C 1368 nt10.31□□□□□ -0.76
SSF1P38789 DLD3YEL071W 1491 nt10.3□□□□□ -0.76
SSF1P38789 PCP1YGR101W 1041 nt10.3□□□□□ -0.76
SSF1P38789 ITR2YOL103W 1830 nt10.3□□□□□ -0.76
SSF1P38789 SLG1YOR008C 1137 nt10.29□□□□□ -0.76
SSF1P38789 THP3YPR045C 1413 nt10.28□□□□□ -0.76
SSF1P38789 KEL3YPL263C 1956 nt10.28□□□□□ -0.76
SSF1P38789 SGA1YIL099W 1650 nt10.26□□□□□ -0.77
SSF1P38789 LEU2YCL018W 1095 nt10.26□□□□□ -0.77
SSF1P38789 YKL133CYKL133C 1392 nt10.26□□□□□ -0.77
SSF1P38789 tA(AGC)DtA(AGC)D 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)FtA(AGC)F 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)GtA(AGC)G 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)HtA(AGC)H 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)JtA(AGC)J 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)K1tA(AGC)K1 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)K2tA(AGC)K2 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)LtA(AGC)L 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)M1tA(AGC)M1 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)M2tA(AGC)M2 73 nt10.25□□□□□ -0.77
SSF1P38789 tA(AGC)PtA(AGC)P 73 nt10.25□□□□□ -0.77
SSF1P38789 TIM44YIL022W 1296 nt10.25□□□□□ -0.77
SSF1P38789 IPL1YPL209C 1104 nt10.25□□□□□ -0.77
SSF1P38789 YCR025CYCR025C 411 nt10.24□□□□□ -0.77
SSF1P38789 CDD1YLR245C 429 nt10.24□□□□□ -0.77
SSF1P38789 FSH2YMR222C 672 nt10.23□□□□□ -0.77
SSF1P38789 MRS6YOR370C 1812 nt10.23□□□□□ -0.77
SSF1P38789 LSR1LSR1 1175 nt10.22□□□□□ -0.77
SSF1P38789 ACO2YJL200C 2370 nt10.22□□□□□ -0.77
SSF1P38789 YHR219WYHR219W 1875 nt10.21□□□□□ -0.77
SSF1P38789 HIS2YFR025C 1008 nt10.21□□□□□ -0.77
SSF1P38789 YKR012CYKR012C 378 nt10.21□□□□□ -0.77
SSF1P38789 VMA11YPL234C 495 nt10.21□□□□□ -0.77
SSF1P38789 NAM8YHR086W 1572 nt10.2□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms