Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 QDR2YIL121W 1629 nt7.46□□□□□ -1.21
CUE1P38428 SOL2YCR073W-A 948 nt7.46□□□□□ -1.22
CUE1P38428 OYE2YHR179W 1203 nt7.46□□□□□ -1.22
CUE1P38428 TPS1YBR126C 1488 nt7.46□□□□□ -1.22
CUE1P38428 DIG1YPL049C 1359 nt7.46□□□□□ -1.22
CUE1P38428 MDL2YPL270W 2322 nt7.45□□□□□ -1.22
CUE1P38428 MDM35YKL053C-A 261 nt7.45□□□□□ -1.22
CUE1P38428 NBA1YOL070C 1506 nt7.44□□□□□ -1.22
CUE1P38428 ADH7YCR105W 1086 nt7.44□□□□□ -1.22
CUE1P38428 YLR349WYLR349W 507 nt7.43□□□□□ -1.22
CUE1P38428 GPN2YOR262W 1044 nt7.43□□□□□ -1.22
CUE1P38428 SSL2YIL143C 2532 nt7.42□□□□□ -1.22
CUE1P38428 PAU15YIR041W 375 nt7.42□□□□□ -1.22
CUE1P38428 AIM1YAL046C 357 nt7.42□□□□□ -1.22
CUE1P38428 GID8YMR135C 1368 nt7.42□□□□□ -1.22
CUE1P38428 HXT10YFL011W 1641 nt7.41□□□□□ -1.22
CUE1P38428 TMA23YMR269W 636 nt7.41□□□□□ -1.22
CUE1P38428 YHR219WYHR219W 1875 nt7.41□□□□□ -1.22
CUE1P38428 ASP3-1YLR155C 1089 nt7.4□□□□□ -1.22
CUE1P38428 ASP3-2YLR157C 1089 nt7.4□□□□□ -1.22
CUE1P38428 ASP3-3YLR158C 1089 nt7.4□□□□□ -1.22
CUE1P38428 ASP3-4YLR160C 1089 nt7.4□□□□□ -1.22
CUE1P38428 MRS6YOR370C 1812 nt7.39□□□□□ -1.23
CUE1P38428 DDI1YER143W 1287 nt7.39□□□□□ -1.23
CUE1P38428 YRF1-3YGR296W 5580 nt7.38□□□□□ -1.23
CUE1P38428 YRF1-6YNL339C 5580 nt7.38□□□□□ -1.23
CUE1P38428 YRF1-7YPL283C 5580 nt7.38□□□□□ -1.23
CUE1P38428 YIL177CYIL177C 5277 nt7.38□□□□□ -1.23
CUE1P38428 DLD3YEL071W 1491 nt7.38□□□□□ -1.23
CUE1P38428 YEL008WYEL008W 381 nt7.38□□□□□ -1.23
CUE1P38428 CWP2YKL096W-A 279 nt7.38□□□□□ -1.23
CUE1P38428 RIB7YBR153W 735 nt7.38□□□□□ -1.23
CUE1P38428 SAC7YDR389W 1965 nt7.37□□□□□ -1.23
CUE1P38428 ERG13YML126C 1476 nt7.36□□□□□ -1.23
CUE1P38428 ENT4YLL038C 744 nt7.36□□□□□ -1.23
CUE1P38428 YDR306CYDR306C 1437 nt7.35□□□□□ -1.23
CUE1P38428 YKL133CYKL133C 1392 nt7.35□□□□□ -1.23
CUE1P38428 LSM5YER146W 282 nt7.35□□□□□ -1.23
CUE1P38428 IMO32YGR031W 1029 nt7.35□□□□□ -1.23
CUE1P38428 SNZ1YMR096W 894 nt7.35□□□□□ -1.23
CUE1P38428 RRT8YOL048C 1029 nt7.35□□□□□ -1.23
CUE1P38428 DAK2YFL053W 1776 nt7.35□□□□□ -1.23
CUE1P38428 CPD1YGR247W 720 nt7.34□□□□□ -1.23
CUE1P38428 YLR046CYLR046C 813 nt7.34□□□□□ -1.23
CUE1P38428 LSR1LSR1 1175 nt7.34□□□□□ -1.23
CUE1P38428 ITR2YOL103W 1830 nt7.34□□□□□ -1.24
CUE1P38428 UFD1YGR048W 1086 nt7.33□□□□□ -1.24
CUE1P38428 YPR126CYPR126C 309 nt7.32□□□□□ -1.24
CUE1P38428 AGP3YFL055W 1677 nt7.32□□□□□ -1.24
CUE1P38428 MIM1YOL026C 342 nt7.31□□□□□ -1.24
CUE1P38428 CCT5YJR064W 1689 nt7.31□□□□□ -1.24
CUE1P38428 LPD1YFL018C 1500 nt7.31□□□□□ -1.24
CUE1P38428 TPN1YGL186C 1740 nt7.3□□□□□ -1.24
CUE1P38428 FIT1YDR534C 1587 nt7.3□□□□□ -1.24
CUE1P38428 tS(GCU)LtS(GCU)L 80 nt7.29□□□□□ -1.24
CUE1P38428 YFR036W-AYFR036W-A 651 nt7.28□□□□□ -1.24
CUE1P38428 TOM71YHR117W 1920 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)BtD(GUC)B 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)DtD(GUC)D 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)G1tD(GUC)G1 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)G2tD(GUC)G2 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)I1tD(GUC)I1 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)I2tD(GUC)I2 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)J1tD(GUC)J1 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)J2tD(GUC)J2 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)J3tD(GUC)J3 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)J4tD(GUC)J4 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)KtD(GUC)K 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)L1tD(GUC)L1 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)L2tD(GUC)L2 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)MtD(GUC)M 72 nt7.27□□□□□ -1.25
CUE1P38428 tD(GUC)OtD(GUC)O 72 nt7.27□□□□□ -1.25
CUE1P38428 HBS1YKR084C 1836 nt7.27□□□□□ -1.25
CUE1P38428 OPI3YJR073C 621 nt7.25□□□□□ -1.25
CUE1P38428 VMA11YPL234C 495 nt7.25□□□□□ -1.25
CUE1P38428 RPD3YNL330C 1302 nt7.25□□□□□ -1.25
CUE1P38428 ADE8YDR408C 645 nt7.24□□□□□ -1.25
CUE1P38428 GNP1YDR508C 1992 nt7.24□□□□□ -1.25
CUE1P38428 ESS1YJR017C 513 nt7.23□□□□□ -1.25
CUE1P38428 YJR114WYJR114W 393 nt7.23□□□□□ -1.25
CUE1P38428 YNR064CYNR064C 873 nt7.23□□□□□ -1.25
CUE1P38428 ALR1YOL130W 2580 nt7.22□□□□□ -1.25
CUE1P38428 YMR262WYMR262W 942 nt7.22□□□□□ -1.25
CUE1P38428 TVP23YDR084C 600 nt7.21□□□□□ -1.26
CUE1P38428 TIM44YIL022W 1296 nt7.21□□□□□ -1.26
CUE1P38428 CTI6YPL181W 1521 nt7.21□□□□□ -1.26
CUE1P38428 SPS100YHR139C 981 nt7.2□□□□□ -1.26
CUE1P38428 ELO1YJL196C 933 nt7.2□□□□□ -1.26
CUE1P38428 SUV3YPL029W 2214 nt7.2□□□□□ -1.26
CUE1P38428 INH1YDL181W 258 nt7.19□□□□□ -1.26
CUE1P38428 SFL1YOR140W 2301 nt7.19□□□□□ -1.26
CUE1P38428 YMR265CYMR265C 1386 nt7.19□□□□□ -1.26
CUE1P38428 YRF1-1YDR545W 5391 nt7.19□□□□□ -1.26
CUE1P38428 YRF1-5YLR467W 5391 nt7.19□□□□□ -1.26
CUE1P38428 YRF1-8YOR396W 5391 nt7.19□□□□□ -1.26
CUE1P38428 DPL1YDR294C 1770 nt7.18□□□□□ -1.26
CUE1P38428 SNX3YOR357C 489 nt7.18□□□□□ -1.26
CUE1P38428 IML3YBR107C 738 nt7.18□□□□□ -1.26
CUE1P38428 RIM2YBR192W 1134 nt7.18□□□□□ -1.26
CUE1P38428 FRA1YLL029W 2250 nt7.18□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 27.3 ms