Protein–RNA interactions for Protein: P38287

CSH1, Mannosyl phosphorylinositol ceramide synthase CSH1, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSH1P38287 ERG13YML126C 1476 nt7.11□□□□□ -1.27
CSH1P38287 RPD3YNL330C 1302 nt7.11□□□□□ -1.27
CSH1P38287 LSR1LSR1 1175 nt7.11□□□□□ -1.27
CSH1P38287 MCM5YLR274W 2328 nt7.11□□□□□ -1.27
CSH1P38287 RBG2YGR173W 1107 nt7.1□□□□□ -1.27
CSH1P38287 TIP1YBR067C 633 nt7.1□□□□□ -1.27
CSH1P38287 ITR2YOL103W 1830 nt7.09□□□□□ -1.27
CSH1P38287 TMA23YMR269W 636 nt7.09□□□□□ -1.27
CSH1P38287 GAL2YLR081W 1725 nt7.08□□□□□ -1.28
CSH1P38287 MDM35YKL053C-A 261 nt7.08□□□□□ -1.28
CSH1P38287 GAL3YDR009W 1563 nt7.08□□□□□ -1.28
CSH1P38287 HXK1YFR053C 1458 nt7.06□□□□□ -1.28
CSH1P38287 CWP2YKL096W-A 279 nt7.06□□□□□ -1.28
CSH1P38287 VMA11YPL234C 495 nt7.05□□□□□ -1.28
CSH1P38287 ALD5YER073W 1563 nt7.04□□□□□ -1.28
CSH1P38287 IMO32YGR031W 1029 nt7.04□□□□□ -1.28
CSH1P38287 SAC7YDR389W 1965 nt7.03□□□□□ -1.28
CSH1P38287 YNR029CYNR029C 1290 nt7.03□□□□□ -1.28
CSH1P38287 RRT8YOL048C 1029 nt7.03□□□□□ -1.28
CSH1P38287 SNX3YOR357C 489 nt7.03□□□□□ -1.28
CSH1P38287 URA8YJR103W 1737 nt7.03□□□□□ -1.28
CSH1P38287 YHR218WYHR218W 1812 nt7.03□□□□□ -1.28
CSH1P38287 RSC4YKR008W 1878 nt7.02□□□□□ -1.28
CSH1P38287 HXT10YFL011W 1641 nt7.02□□□□□ -1.29
CSH1P38287 YMR262WYMR262W 942 nt7.01□□□□□ -1.29
CSH1P38287 ADH1YOL086C 1047 nt7.01□□□□□ -1.29
CSH1P38287 ADE8YDR408C 645 nt7□□□□□ -1.29
CSH1P38287 ELO1YJL196C 933 nt7□□□□□ -1.29
CSH1P38287 KRR1YCL059C 951 nt6.99□□□□□ -1.29
CSH1P38287 YJR114WYJR114W 393 nt6.99□□□□□ -1.29
CSH1P38287 RPC31YNL151C 756 nt6.98□□□□□ -1.29
CSH1P38287 YNR064CYNR064C 873 nt6.97□□□□□ -1.29
CSH1P38287 DAK2YFL053W 1776 nt6.97□□□□□ -1.29
CSH1P38287 RIM2YBR192W 1134 nt6.96□□□□□ -1.3
CSH1P38287 KEL3YPL263C 1956 nt6.95□□□□□ -1.3
CSH1P38287 YFR036W-AYFR036W-A 651 nt6.95□□□□□ -1.3
CSH1P38287 RPN14YGL004C 1254 nt6.95□□□□□ -1.3
CSH1P38287 YOR072WYOR072W 315 nt6.95□□□□□ -1.3
CSH1P38287 DPL1YDR294C 1770 nt6.95□□□□□ -1.3
CSH1P38287 YMR265CYMR265C 1386 nt6.95□□□□□ -1.3
CSH1P38287 PCP1YGR101W 1041 nt6.94□□□□□ -1.3
CSH1P38287 INH1YDL181W 258 nt6.93□□□□□ -1.3
CSH1P38287 OPI3YJR073C 621 nt6.93□□□□□ -1.3
CSH1P38287 HAP5YOR358W 729 nt6.93□□□□□ -1.3
CSH1P38287 FRA1YLL029W 2250 nt6.93□□□□□ -1.3
CSH1P38287 AGP3YFL055W 1677 nt6.93□□□□□ -1.3
CSH1P38287 SUV3YPL029W 2214 nt6.92□□□□□ -1.3
CSH1P38287 TVP23YDR084C 600 nt6.92□□□□□ -1.3
CSH1P38287 SNZ1YMR096W 894 nt6.92□□□□□ -1.3
CSH1P38287 LEU4YNL104C 1860 nt6.92□□□□□ -1.3
CSH1P38287 IML3YBR107C 738 nt6.91□□□□□ -1.3
CSH1P38287 CCT5YJR064W 1689 nt6.9□□□□□ -1.3
CSH1P38287 SPS100YHR139C 981 nt6.9□□□□□ -1.3
CSH1P38287 YJL195CYJL195C 702 nt6.89□□□□□ -1.31
CSH1P38287 snR31snR31 225 nt6.89□□□□□ -1.31
CSH1P38287 MAS1YLR163C 1389 nt6.89□□□□□ -1.31
CSH1P38287 YRF1-2YER190W 5046 nt6.89□□□□□ -1.31
CSH1P38287 CTI6YPL181W 1521 nt6.88□□□□□ -1.31
CSH1P38287 YPR126CYPR126C 309 nt6.88□□□□□ -1.31
CSH1P38287 ENO2YHR174W 1314 nt6.87□□□□□ -1.31
CSH1P38287 YDR467CYDR467C 327 nt6.87□□□□□ -1.31
CSH1P38287 SFL1YOR140W 2301 nt6.87□□□□□ -1.31
CSH1P38287 THI72YOR192C 1800 nt6.85□□□□□ -1.31
CSH1P38287 MET1YKR069W 1782 nt6.85□□□□□ -1.31
CSH1P38287 CRC1YOR100C 984 nt6.85□□□□□ -1.31
CSH1P38287 MEX67YPL169C 1800 nt6.85□□□□□ -1.31
CSH1P38287 YDR510C-AYDR510C-A 117 nt6.84□□□□□ -1.31
CSH1P38287 ABZ2YMR289W 1125 nt6.84□□□□□ -1.31
CSH1P38287 NBA1YOL070C 1506 nt6.84□□□□□ -1.31
CSH1P38287 NPP2YEL016C 1482 nt6.83□□□□□ -1.32
CSH1P38287 AMF1YOR378W 1548 nt6.82□□□□□ -1.32
CSH1P38287 SWT21YNL187W 1074 nt6.82□□□□□ -1.32
CSH1P38287 FUN14YAL008W 597 nt6.81□□□□□ -1.32
CSH1P38287 YKL053WYKL053W 375 nt6.81□□□□□ -1.32
CSH1P38287 MHF1YOL086W-A 273 nt6.81□□□□□ -1.32
CSH1P38287 YEL008WYEL008W 381 nt6.8□□□□□ -1.32
CSH1P38287 TAF13YML098W 504 nt6.8□□□□□ -1.32
CSH1P38287 KGD2YDR148C 1392 nt6.8□□□□□ -1.32
CSH1P38287 GPM1YKL152C 744 nt6.79□□□□□ -1.32
CSH1P38287 MDL2YPL270W 2322 nt6.78□□□□□ -1.32
CSH1P38287 tE(CUC)DtE(CUC)D 72 nt6.78□□□□□ -1.32
CSH1P38287 tE(CUC)ItE(CUC)I 72 nt6.78□□□□□ -1.32
CSH1P38287 TPC1YGR096W 945 nt6.78□□□□□ -1.32
CSH1P38287 GNP1YDR508C 1992 nt6.77□□□□□ -1.33
CSH1P38287 POT1YIL160C 1254 nt6.77□□□□□ -1.33
CSH1P38287 YMC2YBR104W 990 nt6.77□□□□□ -1.33
CSH1P38287 YBL095WYBL095W 813 nt6.76□□□□□ -1.33
CSH1P38287 LEU2YCL018W 1095 nt6.76□□□□□ -1.33
CSH1P38287 MTO1YGL236C 2010 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)BtD(GUC)B 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)DtD(GUC)D 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)G1tD(GUC)G1 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)G2tD(GUC)G2 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)I1tD(GUC)I1 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)I2tD(GUC)I2 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)J1tD(GUC)J1 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)J2tD(GUC)J2 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)J3tD(GUC)J3 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)J4tD(GUC)J4 72 nt6.74□□□□□ -1.33
CSH1P38287 tD(GUC)KtD(GUC)K 72 nt6.74□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 40.4 ms