Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 KES1YPL145C 1305 nt8.68□□□□□ -1.02
LDB7P38210 SAC7YDR389W 1965 nt8.67□□□□□ -1.02
LDB7P38210 YJR114WYJR114W 393 nt8.67□□□□□ -1.02
LDB7P38210 STP3YLR375W 1032 nt8.67□□□□□ -1.02
LDB7P38210 TUB4YLR212C 1422 nt8.65□□□□□ -1.02
LDB7P38210 APS2YJR058C 444 nt8.65□□□□□ -1.02
LDB7P38210 TVP23YDR084C 600 nt8.64□□□□□ -1.03
LDB7P38210 ABZ2YMR289W 1125 nt8.64□□□□□ -1.03
LDB7P38210 YBR232CYBR232C 360 nt8.64□□□□□ -1.03
LDB7P38210 OPI3YJR073C 621 nt8.63□□□□□ -1.03
LDB7P38210 SGA1YIL099W 1650 nt8.62□□□□□ -1.03
LDB7P38210 GID8YMR135C 1368 nt8.62□□□□□ -1.03
LDB7P38210 YNR064CYNR064C 873 nt8.62□□□□□ -1.03
LDB7P38210 NIF3YGL221C 867 nt8.61□□□□□ -1.03
LDB7P38210 DLD3YEL071W 1491 nt8.61□□□□□ -1.03
LDB7P38210 SEN2YLR105C 1134 nt8.6□□□□□ -1.03
LDB7P38210 HEL2YDR266C 1920 nt8.6□□□□□ -1.03
LDB7P38210 PAR32YDL173W 888 nt8.59□□□□□ -1.03
LDB7P38210 ITR2YOL103W 1830 nt8.59□□□□□ -1.03
LDB7P38210 ENO2YHR174W 1314 nt8.57□□□□□ -1.04
LDB7P38210 MRS6YOR370C 1812 nt8.57□□□□□ -1.04
LDB7P38210 ELO1YJL196C 933 nt8.57□□□□□ -1.04
LDB7P38210 YKL133CYKL133C 1392 nt8.57□□□□□ -1.04
LDB7P38210 HIS2YFR025C 1008 nt8.56□□□□□ -1.04
LDB7P38210 YHR219WYHR219W 1875 nt8.55□□□□□ -1.04
LDB7P38210 KRE1YNL322C 942 nt8.55□□□□□ -1.04
LDB7P38210 ZAP1YJL056C 2643 nt8.55□□□□□ -1.04
LDB7P38210 UGP1YKL035W 1500 nt8.54□□□□□ -1.04
LDB7P38210 LSR1LSR1 1175 nt8.54□□□□□ -1.04
LDB7P38210 TIP1YBR067C 633 nt8.54□□□□□ -1.04
LDB7P38210 NAP1YKR048C 1254 nt8.53□□□□□ -1.04
LDB7P38210 AMF1YOR378W 1548 nt8.53□□□□□ -1.04
LDB7P38210 PCP1YGR101W 1041 nt8.52□□□□□ -1.05
LDB7P38210 KEL3YPL263C 1956 nt8.52□□□□□ -1.05
LDB7P38210 TPC1YGR096W 945 nt8.51□□□□□ -1.05
LDB7P38210 YJL064WYJL064W 396 nt8.51□□□□□ -1.05
LDB7P38210 SPE2YOL052C 1191 nt8.51□□□□□ -1.05
LDB7P38210 VMA11YPL234C 495 nt8.51□□□□□ -1.05
LDB7P38210 NAS2YIL007C 663 nt8.5□□□□□ -1.05
LDB7P38210 GID7YCL039W 2238 nt8.49□□□□□ -1.05
LDB7P38210 IGD1YFR017C 588 nt8.49□□□□□ -1.05
LDB7P38210 RPD3YNL330C 1302 nt8.48□□□□□ -1.05
LDB7P38210 YMR265CYMR265C 1386 nt8.48□□□□□ -1.05
LDB7P38210 PAU19YMR325W 375 nt8.47□□□□□ -1.05
LDB7P38210 SWT21YNL187W 1074 nt8.47□□□□□ -1.05
LDB7P38210 HAP5YOR358W 729 nt8.47□□□□□ -1.05
LDB7P38210 SUV3YPL029W 2214 nt8.47□□□□□ -1.05
LDB7P38210 SFL1YOR140W 2301 nt8.47□□□□□ -1.05
LDB7P38210 THP3YPR045C 1413 nt8.46□□□□□ -1.05
LDB7P38210 CDD1YLR245C 429 nt8.46□□□□□ -1.06
LDB7P38210 RIM8YGL045W 1629 nt8.46□□□□□ -1.06
LDB7P38210 LEU2YCL018W 1095 nt8.45□□□□□ -1.06
LDB7P38210 MET1YKR069W 1782 nt8.44□□□□□ -1.06
LDB7P38210 RPN14YGL004C 1254 nt8.44□□□□□ -1.06
LDB7P38210 PUP1YOR157C 786 nt8.44□□□□□ -1.06
LDB7P38210 SNX3YOR357C 489 nt8.44□□□□□ -1.06
LDB7P38210 snR31snR31 225 nt8.44□□□□□ -1.06
LDB7P38210 SSL2YIL143C 2532 nt8.43□□□□□ -1.06
LDB7P38210 FSH2YMR222C 672 nt8.42□□□□□ -1.06
LDB7P38210 NAM8YHR086W 1572 nt8.42□□□□□ -1.06
LDB7P38210 YGL114WYGL114W 2178 nt8.42□□□□□ -1.06
LDB7P38210 TIM44YIL022W 1296 nt8.41□□□□□ -1.06
LDB7P38210 CRC1YOR100C 984 nt8.41□□□□□ -1.06
LDB7P38210 ODC1YPL134C 933 nt8.4□□□□□ -1.06
LDB7P38210 tA(AGC)DtA(AGC)D 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)FtA(AGC)F 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)GtA(AGC)G 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)HtA(AGC)H 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)JtA(AGC)J 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)K1tA(AGC)K1 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)K2tA(AGC)K2 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)LtA(AGC)L 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)M1tA(AGC)M1 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)M2tA(AGC)M2 73 nt8.39□□□□□ -1.07
LDB7P38210 tA(AGC)PtA(AGC)P 73 nt8.39□□□□□ -1.07
LDB7P38210 YKL053WYKL053W 375 nt8.39□□□□□ -1.07
LDB7P38210 CWP2YKL096W-A 279 nt8.39□□□□□ -1.07
LDB7P38210 ADH3YMR083W 1128 nt8.39□□□□□ -1.07
LDB7P38210 YKR012CYKR012C 378 nt8.38□□□□□ -1.07
LDB7P38210 PHB2YGR231C 933 nt8.37□□□□□ -1.07
LDB7P38210 IPL1YPL209C 1104 nt8.37□□□□□ -1.07
LDB7P38210 ESBP6YNL125C 2022 nt8.36□□□□□ -1.07
LDB7P38210 FLX1YIL134W 936 nt8.36□□□□□ -1.07
LDB7P38210 MOB1YIL106W 945 nt8.35□□□□□ -1.07
LDB7P38210 REX2YLR059C 810 nt8.35□□□□□ -1.07
LDB7P38210 RPC31YNL151C 756 nt8.35□□□□□ -1.07
LDB7P38210 RIM2YBR192W 1134 nt8.35□□□□□ -1.07
LDB7P38210 YCR025CYCR025C 411 nt8.34□□□□□ -1.07
LDB7P38210 YMR209CYMR209C 1374 nt8.34□□□□□ -1.07
LDB7P38210 MET2YNL277W 1461 nt8.33□□□□□ -1.08
LDB7P38210 SRP54YPR088C 1626 nt8.33□□□□□ -1.08
LDB7P38210 KRR1YCL059C 951 nt8.33□□□□□ -1.08
LDB7P38210 SLG1YOR008C 1137 nt8.33□□□□□ -1.08
LDB7P38210 SDS24YBR214W 1584 nt8.31□□□□□ -1.08
LDB7P38210 SAN1YDR143C 1833 nt8.31□□□□□ -1.08
LDB7P38210 KGD2YDR148C 1392 nt8.31□□□□□ -1.08
LDB7P38210 MDM35YKL053C-A 261 nt8.3□□□□□ -1.08
LDB7P38210 ACO2YJL200C 2370 nt8.3□□□□□ -1.08
LDB7P38210 DPL1YDR294C 1770 nt8.29□□□□□ -1.08
LDB7P38210 MAE1YKL029C 2010 nt8.29□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms