Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab5cP35278 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.71■□□□□ 0.75
Rab5cP35278 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab5cP35278 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab5cP35278 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Rab5cP35278 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab5cP35278 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab5cP35278 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab5cP35278 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab5cP35278 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rab5cP35278 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab5cP35278 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab5cP35278 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab5cP35278 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab5cP35278 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab5cP35278 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab5cP35278 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab5cP35278 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab5cP35278 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab5cP35278 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab5cP35278 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab5cP35278 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab5cP35278 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab5cP35278 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.64■□□□□ 0.73
Rab5cP35278 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.64■□□□□ 0.73
Rab5cP35278 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rab5cP35278 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.64■□□□□ 0.73
Rab5cP35278 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab5cP35278 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab5cP35278 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rab5cP35278 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rab5cP35278 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab5cP35278 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab5cP35278 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab5cP35278 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab5cP35278 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.61■□□□□ 0.73
Rab5cP35278 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab5cP35278 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.61■□□□□ 0.73
Rab5cP35278 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab5cP35278 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.6■□□□□ 0.73
Rab5cP35278 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rab5cP35278 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab5cP35278 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rab5cP35278 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.59■□□□□ 0.73
Rab5cP35278 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab5cP35278 Gm25238-201ENSMUST00000174914 89 ntBASIC19.59■□□□□ 0.73
Rab5cP35278 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rab5cP35278 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab5cP35278 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.58■□□□□ 0.72
Rab5cP35278 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab5cP35278 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab5cP35278 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab5cP35278 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rab5cP35278 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rab5cP35278 Rab21-202ENSMUST00000218831 843 ntBASIC19.56■□□□□ 0.72
Rab5cP35278 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
Rab5cP35278 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab5cP35278 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab5cP35278 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rab5cP35278 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab5cP35278 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab5cP35278 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab5cP35278 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Rab5cP35278 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.54■□□□□ 0.72
Rab5cP35278 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rab5cP35278 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rab5cP35278 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab5cP35278 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.53■□□□□ 0.72
Rab5cP35278 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab5cP35278 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab5cP35278 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab5cP35278 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab5cP35278 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab5cP35278 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab5cP35278 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab5cP35278 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab5cP35278 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab5cP35278 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab5cP35278 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Rab5cP35278 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rab5cP35278 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rab5cP35278 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab5cP35278 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Rab5cP35278 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rab5cP35278 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab5cP35278 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab5cP35278 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.47■□□□□ 0.71
Rab5cP35278 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab5cP35278 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rab5cP35278 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab5cP35278 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.46■□□□□ 0.71
Rab5cP35278 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Rab5cP35278 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rab5cP35278 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab5cP35278 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab5cP35278 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab5cP35278 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rab5cP35278 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab5cP35278 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab5cP35278 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms