Protein–RNA interactions for Protein: P35187

SGS1, ATP-dependent helicase SGS1, yeastyeast

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGS1P35187 YJL067WYJL067W 351 nt16.15■□□□□ 0.18
SGS1P35187 ZRT3YKL175W 1512 nt16.14■□□□□ 0.17
SGS1P35187 PHB2YGR231C 933 nt16.11■□□□□ 0.17
SGS1P35187 TGA1tA(UGC)A 73 nt16.09■□□□□ 0.17
SGS1P35187 tA(UGC)EtA(UGC)E 73 nt16.09■□□□□ 0.17
SGS1P35187 tA(UGC)GtA(UGC)G 73 nt16.09■□□□□ 0.17
SGS1P35187 tA(UGC)LtA(UGC)L 73 nt16.09■□□□□ 0.17
SGS1P35187 tA(UGC)OtA(UGC)O 73 nt16.09■□□□□ 0.17
SGS1P35187 ERG13YML126C 1476 nt16.09■□□□□ 0.17
SGS1P35187 MOB1YIL106W 945 nt16.07■□□□□ 0.16
SGS1P35187 THP3YPR045C 1413 nt16.07■□□□□ 0.16
SGS1P35187 CWC15YDR163W 528 nt16.05■□□□□ 0.16
SGS1P35187 FCY1YPR062W 477 nt16.01■□□□□ 0.15
SGS1P35187 SER2YGR208W 930 nt15.99■□□□□ 0.15
SGS1P35187 ENO2YHR174W 1314 nt15.99■□□□□ 0.15
SGS1P35187 ASP3-1YLR155C 1089 nt15.98■□□□□ 0.15
SGS1P35187 ASP3-2YLR157C 1089 nt15.98■□□□□ 0.15
SGS1P35187 ASP3-3YLR158C 1089 nt15.98■□□□□ 0.15
SGS1P35187 ASP3-4YLR160C 1089 nt15.98■□□□□ 0.15
SGS1P35187 TPC1YGR096W 945 nt15.97■□□□□ 0.15
SGS1P35187 ACH1YBL015W 1581 nt15.97■□□□□ 0.15
SGS1P35187 YMR007WYMR007W 381 nt15.97■□□□□ 0.15
SGS1P35187 OPI3YJR073C 621 nt15.96■□□□□ 0.15
SGS1P35187 TVP23YDR084C 600 nt15.94■□□□□ 0.14
SGS1P35187 PCP1YGR101W 1041 nt15.94■□□□□ 0.14
SGS1P35187 RRT8YOL048C 1029 nt15.94■□□□□ 0.14
SGS1P35187 PAU21YOR394W 495 nt15.89■□□□□ 0.13
SGS1P35187 PAU22YPL282C 495 nt15.89■□□□□ 0.13
SGS1P35187 YKR012CYKR012C 378 nt15.88■□□□□ 0.13
SGS1P35187 BET2YPR176C 978 nt15.88■□□□□ 0.13
SGS1P35187 HTS1YPR033C 1641 nt15.84■□□□□ 0.13
SGS1P35187 CYC3YAL039C 810 nt15.84■□□□□ 0.13
SGS1P35187 AIM1YAL046C 357 nt15.84■□□□□ 0.13
SGS1P35187 YOR343CYOR343C 327 nt15.84■□□□□ 0.13
SGS1P35187 GRH1YDR517W 1119 nt15.83■□□□□ 0.12
SGS1P35187 RCR1YBR005W 642 nt15.82■□□□□ 0.12
SGS1P35187 VPS62YGR141W 1404 nt15.79■□□□□ 0.12
SGS1P35187 FSH2YMR222C 672 nt15.78■□□□□ 0.12
SGS1P35187 DIG1YPL049C 1359 nt15.78■□□□□ 0.12
SGS1P35187 AMF1YOR378W 1548 nt15.78■□□□□ 0.12
SGS1P35187 KAE1YKR038C 1161 nt15.77■□□□□ 0.11
SGS1P35187 SAC7YDR389W 1965 nt15.76■□□□□ 0.11
SGS1P35187 YGR210CYGR210C 1236 nt15.74■□□□□ 0.11
SGS1P35187 NAM8YHR086W 1572 nt15.73■□□□□ 0.11
SGS1P35187 YAL016C-AYAL016C-A 315 nt15.73■□□□□ 0.11
SGS1P35187 ERO1YML130C 1692 nt15.72■□□□□ 0.11
SGS1P35187 RPL12BYDR418W 498 nt15.71■□□□□ 0.11
SGS1P35187 EMC3YKL207W 762 nt15.69■□□□□ 0.1
SGS1P35187 YNR064CYNR064C 873 nt15.69■□□□□ 0.1
SGS1P35187 SDS24YBR214W 1584 nt15.69■□□□□ 0.1
SGS1P35187 YLR280CYLR280C 351 nt15.68■□□□□ 0.1
SGS1P35187 ELO1YJL196C 933 nt15.68■□□□□ 0.1
SGS1P35187 HRA1HRA1 564 nt15.67■□□□□ 0.1
SGS1P35187 YDL086WYDL086W 822 nt15.63■□□□□ 0.09
SGS1P35187 LEU2YCL018W 1095 nt15.63■□□□□ 0.09
SGS1P35187 SRP102YKL154W 735 nt15.62■□□□□ 0.09
SGS1P35187 PBP1YGR178C 2169 nt15.62■□□□□ 0.09
SGS1P35187 ENO1YGR254W 1314 nt15.61■□□□□ 0.09
SGS1P35187 ALG12YNR030W 1656 nt15.59■□□□□ 0.09
SGS1P35187 YJL160CYJL160C 864 nt15.59■□□□□ 0.09
SGS1P35187 LSB6YJL100W 1824 nt15.58■□□□□ 0.09
SGS1P35187 YOR268CYOR268C 399 nt15.56■□□□□ 0.08
SGS1P35187 VBA3YCL069W 1377 nt15.55■□□□□ 0.08
SGS1P35187 YMR210WYMR210W 1350 nt15.55■□□□□ 0.08
SGS1P35187 REX2YLR059C 810 nt15.53■□□□□ 0.08
SGS1P35187 YPL108WYPL108W 507 nt15.52■□□□□ 0.08
SGS1P35187 MFG1YDL233W 1377 nt15.52■□□□□ 0.08
SGS1P35187 PET18YCR020C 648 nt15.51■□□□□ 0.07
SGS1P35187 tL(UAA)B1tL(UAA)B1 84 nt15.51■□□□□ 0.07
SGS1P35187 tL(UAA)B2tL(UAA)B2 84 nt15.51■□□□□ 0.07
SGS1P35187 tL(UAA)DtL(UAA)D 84 nt15.51■□□□□ 0.07
SGS1P35187 SUP51tL(UAA)J 84 nt15.51■□□□□ 0.07
SGS1P35187 tL(UAA)KtL(UAA)K 84 nt15.51■□□□□ 0.07
SGS1P35187 tL(UAA)LtL(UAA)L 84 nt15.51■□□□□ 0.07
SGS1P35187 tL(UAA)NtL(UAA)N 84 nt15.51■□□□□ 0.07
SGS1P35187 YIL100C-AYIL100C-A 339 nt15.51■□□□□ 0.07
SGS1P35187 YAT1YAR035W 2064 nt15.5■□□□□ 0.07
SGS1P35187 YOR325WYOR325W 474 nt15.5■□□□□ 0.07
SGS1P35187 SFL1YOR140W 2301 nt15.49■□□□□ 0.07
SGS1P35187 YKL053WYKL053W 375 nt15.48■□□□□ 0.07
SGS1P35187 YLR046CYLR046C 813 nt15.48■□□□□ 0.07
SGS1P35187 SWT21YNL187W 1074 nt15.48■□□□□ 0.07
SGS1P35187 NAR1YNL240C 1476 nt15.48■□□□□ 0.07
SGS1P35187 CYT2YKL087C 675 nt15.46■□□□□ 0.07
SGS1P35187 CCT2YIL142W 1584 nt15.46■□□□□ 0.06
SGS1P35187 UTR5YEL035C 501 nt15.45■□□□□ 0.06
SGS1P35187 YMR206WYMR206W 942 nt15.43■□□□□ 0.06
SGS1P35187 MET1YKR069W 1782 nt15.43■□□□□ 0.06
SGS1P35187 ITR2YOL103W 1830 nt15.39■□□□□ 0.05
SGS1P35187 HOG1YLR113W 1308 nt15.39■□□□□ 0.05
SGS1P35187 ENT4YLL038C 744 nt15.38■□□□□ 0.05
SGS1P35187 RDN25-1RDN25-1 3396 nt15.38■□□□□ 0.05
SGS1P35187 RDN25-2RDN25-2 3396 nt15.38■□□□□ 0.05
SGS1P35187 MRP1YDR347W 966 nt15.36■□□□□ 0.05
SGS1P35187 LSP1YPL004C 1026 nt15.36■□□□□ 0.05
SGS1P35187 KEL3YPL263C 1956 nt15.36■□□□□ 0.05
SGS1P35187 SRP54YPR088C 1626 nt15.35■□□□□ 0.05
SGS1P35187 EDC2YER035W 438 nt15.34■□□□□ 0.05
SGS1P35187 YJR149WYJR149W 1215 nt15.33■□□□□ 0.04
SGS1P35187 SUV3YPL029W 2214 nt15.3■□□□□ 0.04
Retrieved 100 of 7,029 protein–RNA pairs in 8.5 ms