Protein–RNA interactions for Protein: P28301

Lox, Protein-lysine 6-oxidase, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LoxP28301 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LoxP28301 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LoxP28301 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LoxP28301 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LoxP28301 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LoxP28301 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.64■□□□□ 0.89
LoxP28301 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LoxP28301 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.63■□□□□ 0.89
LoxP28301 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LoxP28301 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LoxP28301 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.63■□□□□ 0.89
LoxP28301 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LoxP28301 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LoxP28301 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LoxP28301 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LoxP28301 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LoxP28301 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LoxP28301 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LoxP28301 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.59■□□□□ 0.89
LoxP28301 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LoxP28301 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LoxP28301 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.57■□□□□ 0.88
LoxP28301 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
LoxP28301 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LoxP28301 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LoxP28301 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.56■□□□□ 0.88
LoxP28301 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.56■□□□□ 0.88
LoxP28301 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LoxP28301 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LoxP28301 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LoxP28301 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LoxP28301 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LoxP28301 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LoxP28301 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LoxP28301 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.53■□□□□ 0.88
LoxP28301 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LoxP28301 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.52■□□□□ 0.88
LoxP28301 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LoxP28301 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.52■□□□□ 0.88
LoxP28301 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LoxP28301 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LoxP28301 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.51■□□□□ 0.87
LoxP28301 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LoxP28301 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LoxP28301 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LoxP28301 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LoxP28301 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LoxP28301 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LoxP28301 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.49■□□□□ 0.87
LoxP28301 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LoxP28301 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LoxP28301 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LoxP28301 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LoxP28301 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.47■□□□□ 0.87
LoxP28301 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LoxP28301 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.47■□□□□ 0.87
LoxP28301 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LoxP28301 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.46■□□□□ 0.87
LoxP28301 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.45■□□□□ 0.86
LoxP28301 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.45■□□□□ 0.86
LoxP28301 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LoxP28301 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.45■□□□□ 0.86
LoxP28301 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LoxP28301 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LoxP28301 Gm7432-201ENSMUST00000210343 879 ntBASIC20.43■□□□□ 0.86
LoxP28301 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LoxP28301 Zxda-201ENSMUST00000117281 2621 ntBASIC20.42■□□□□ 0.86
LoxP28301 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LoxP28301 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LoxP28301 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LoxP28301 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LoxP28301 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LoxP28301 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LoxP28301 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.41■□□□□ 0.86
LoxP28301 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.41■□□□□ 0.86
LoxP28301 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LoxP28301 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LoxP28301 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LoxP28301 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.4■□□□□ 0.86
LoxP28301 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LoxP28301 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LoxP28301 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LoxP28301 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.39■□□□□ 0.85
LoxP28301 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.39■□□□□ 0.85
LoxP28301 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LoxP28301 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LoxP28301 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LoxP28301 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LoxP28301 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LoxP28301 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LoxP28301 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.37■□□□□ 0.85
LoxP28301 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LoxP28301 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LoxP28301 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LoxP28301 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.35■□□□□ 0.85
LoxP28301 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LoxP28301 Gm30023-201ENSMUST00000197970 889 ntBASIC20.34■□□□□ 0.85
LoxP28301 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.33■□□□□ 0.84
LoxP28301 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LoxP28301 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms