Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.19■□□□□ 0.98
SnrpbP27048 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SnrpbP27048 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SnrpbP27048 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
SnrpbP27048 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SnrpbP27048 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SnrpbP27048 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SnrpbP27048 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SnrpbP27048 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SnrpbP27048 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SnrpbP27048 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SnrpbP27048 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SnrpbP27048 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SnrpbP27048 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SnrpbP27048 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SnrpbP27048 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
SnrpbP27048 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SnrpbP27048 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SnrpbP27048 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SnrpbP27048 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.09■□□□□ 0.97
SnrpbP27048 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SnrpbP27048 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SnrpbP27048 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SnrpbP27048 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SnrpbP27048 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SnrpbP27048 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SnrpbP27048 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SnrpbP27048 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.07■□□□□ 0.96
SnrpbP27048 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SnrpbP27048 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SnrpbP27048 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SnrpbP27048 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SnrpbP27048 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SnrpbP27048 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SnrpbP27048 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SnrpbP27048 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.06■□□□□ 0.96
SnrpbP27048 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SnrpbP27048 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.04■□□□□ 0.96
SnrpbP27048 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SnrpbP27048 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SnrpbP27048 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SnrpbP27048 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SnrpbP27048 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SnrpbP27048 Peli2-204ENSMUST00000226513 1320 ntBASIC21.03■□□□□ 0.96
SnrpbP27048 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SnrpbP27048 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SnrpbP27048 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SnrpbP27048 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SnrpbP27048 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SnrpbP27048 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SnrpbP27048 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SnrpbP27048 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SnrpbP27048 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21■□□□□ 0.95
SnrpbP27048 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SnrpbP27048 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SnrpbP27048 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SnrpbP27048 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SnrpbP27048 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SnrpbP27048 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SnrpbP27048 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SnrpbP27048 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SnrpbP27048 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SnrpbP27048 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.97■□□□□ 0.95
SnrpbP27048 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SnrpbP27048 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SnrpbP27048 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SnrpbP27048 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SnrpbP27048 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SnrpbP27048 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SnrpbP27048 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SnrpbP27048 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.95■□□□□ 0.94
SnrpbP27048 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SnrpbP27048 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SnrpbP27048 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SnrpbP27048 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SnrpbP27048 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SnrpbP27048 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SnrpbP27048 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SnrpbP27048 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SnrpbP27048 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SnrpbP27048 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SnrpbP27048 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SnrpbP27048 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.9■□□□□ 0.94
SnrpbP27048 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SnrpbP27048 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SnrpbP27048 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.89■□□□□ 0.93
SnrpbP27048 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SnrpbP27048 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SnrpbP27048 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SnrpbP27048 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SnrpbP27048 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SnrpbP27048 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SnrpbP27048 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SnrpbP27048 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SnrpbP27048 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SnrpbP27048 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SnrpbP27048 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SnrpbP27048 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SnrpbP27048 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SnrpbP27048 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms