Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 ACH1YBL015W 1581 nt9.16□□□□□ -0.94
MSH2P25847 YMR209CYMR209C 1374 nt9.15□□□□□ -0.94
MSH2P25847 RAS2YNL098C 969 nt9.15□□□□□ -0.94
MSH2P25847 LSB5YCL034W 1065 nt9.15□□□□□ -0.94
MSH2P25847 GNP1YDR508C 1992 nt9.14□□□□□ -0.95
MSH2P25847 BET2YPR176C 978 nt9.14□□□□□ -0.95
MSH2P25847 OSH7YHR001W 1314 nt9.13□□□□□ -0.95
MSH2P25847 YHL008CYHL008C 1884 nt9.13□□□□□ -0.95
MSH2P25847 YDL086WYDL086W 822 nt9.12□□□□□ -0.95
MSH2P25847 HIS2YFR025C 1008 nt9.12□□□□□ -0.95
MSH2P25847 YMR262WYMR262W 942 nt9.12□□□□□ -0.95
MSH2P25847 GAL3YDR009W 1563 nt9.12□□□□□ -0.95
MSH2P25847 HEM13YDR044W 987 nt9.11□□□□□ -0.95
MSH2P25847 POP2YNR052C 1302 nt9.1□□□□□ -0.95
MSH2P25847 GSF2YML048W 1212 nt9.1□□□□□ -0.95
MSH2P25847 QDR2YIL121W 1629 nt9.09□□□□□ -0.95
MSH2P25847 RPT5YOR117W 1305 nt9.09□□□□□ -0.95
MSH2P25847 COQ8YGL119W 1506 nt9.09□□□□□ -0.95
MSH2P25847 ARO8YGL202W 1503 nt9.09□□□□□ -0.95
MSH2P25847 LSB6YJL100W 1824 nt9.08□□□□□ -0.96
MSH2P25847 TUB4YLR212C 1422 nt9.08□□□□□ -0.96
MSH2P25847 COG1YGL223C 1254 nt9.08□□□□□ -0.96
MSH2P25847 YJL118WYJL118W 660 nt9.08□□□□□ -0.96
MSH2P25847 GTB1YDR221W 2109 nt9.08□□□□□ -0.96
MSH2P25847 MHF1YOL086W-A 273 nt9.07□□□□□ -0.96
MSH2P25847 SOL2YCR073W-A 948 nt9.06□□□□□ -0.96
MSH2P25847 KES1YPL145C 1305 nt9.05□□□□□ -0.96
MSH2P25847 YCP4YCR004C 744 nt9.05□□□□□ -0.96
MSH2P25847 YER152W-AYER152W-A 567 nt9.05□□□□□ -0.96
MSH2P25847 RIB7YBR153W 735 nt9.05□□□□□ -0.96
MSH2P25847 SAM3YPL274W 1764 nt9.04□□□□□ -0.96
MSH2P25847 OYE2YHR179W 1203 nt9.04□□□□□ -0.96
MSH2P25847 POT1YIL160C 1254 nt9.04□□□□□ -0.96
MSH2P25847 SNZ1YMR096W 894 nt9.04□□□□□ -0.96
MSH2P25847 DIG1YPL049C 1359 nt9.03□□□□□ -0.96
MSH2P25847 UGP1YKL035W 1500 nt9.03□□□□□ -0.96
MSH2P25847 TPS1YBR126C 1488 nt9.02□□□□□ -0.96
MSH2P25847 YEL009C-AYEL009C-A 408 nt9.02□□□□□ -0.97
MSH2P25847 EAF3YPR023C 1206 nt9.02□□□□□ -0.97
MSH2P25847 LSM5YER146W 282 nt9.01□□□□□ -0.97
MSH2P25847 AIM1YAL046C 357 nt9.01□□□□□ -0.97
MSH2P25847 YPR126CYPR126C 309 nt9.01□□□□□ -0.97
MSH2P25847 TAT2YOL020W 1779 nt9.01□□□□□ -0.97
MSH2P25847 ASP3-1YLR155C 1089 nt9□□□□□ -0.97
MSH2P25847 ASP3-2YLR157C 1089 nt9□□□□□ -0.97
MSH2P25847 ASP3-3YLR158C 1089 nt9□□□□□ -0.97
MSH2P25847 ASP3-4YLR160C 1089 nt9□□□□□ -0.97
MSH2P25847 SGA1YIL099W 1650 nt9□□□□□ -0.97
MSH2P25847 ZAP1YJL056C 2643 nt8.98□□□□□ -0.97
MSH2P25847 APS2YJR058C 444 nt8.98□□□□□ -0.97
MSH2P25847 HXK1YFR053C 1458 nt8.97□□□□□ -0.97
MSH2P25847 YDR455CYDR455C 309 nt8.96□□□□□ -0.98
MSH2P25847 DDI1YER143W 1287 nt8.96□□□□□ -0.98
MSH2P25847 GID8YMR135C 1368 nt8.96□□□□□ -0.98
MSH2P25847 NIF3YGL221C 867 nt8.95□□□□□ -0.98
MSH2P25847 CYT1YOR065W 930 nt8.95□□□□□ -0.98
MSH2P25847 SAM50YNL026W 1455 nt8.95□□□□□ -0.98
MSH2P25847 PSD1YNL169C 1503 nt8.95□□□□□ -0.98
MSH2P25847 ALD5YER073W 1563 nt8.95□□□□□ -0.98
MSH2P25847 YLR046CYLR046C 813 nt8.94□□□□□ -0.98
MSH2P25847 PAU21YOR394W 495 nt8.94□□□□□ -0.98
MSH2P25847 PAU22YPL282C 495 nt8.94□□□□□ -0.98
MSH2P25847 CTI6YPL181W 1521 nt8.94□□□□□ -0.98
MSH2P25847 FAF1YIL019W 1041 nt8.93□□□□□ -0.98
MSH2P25847 BUD20YLR074C 501 nt8.93□□□□□ -0.98
MSH2P25847 KRE1YNL322C 942 nt8.93□□□□□ -0.98
MSH2P25847 IML3YBR107C 738 nt8.92□□□□□ -0.98
MSH2P25847 DAK2YFL053W 1776 nt8.91□□□□□ -0.98
MSH2P25847 FTH1YBR207W 1398 nt8.9□□□□□ -0.98
MSH2P25847 IGD1YFR017C 588 nt8.9□□□□□ -0.98
MSH2P25847 TMA23YMR269W 636 nt8.9□□□□□ -0.98
MSH2P25847 YKL133CYKL133C 1392 nt8.89□□□□□ -0.99
MSH2P25847 ENT4YLL038C 744 nt8.89□□□□□ -0.99
MSH2P25847 ERG13YML126C 1476 nt8.89□□□□□ -0.99
MSH2P25847 YTH1YPR107C 627 nt8.88□□□□□ -0.99
MSH2P25847 MRS6YOR370C 1812 nt8.88□□□□□ -0.99
MSH2P25847 SWM1YDR260C 513 nt8.87□□□□□ -0.99
MSH2P25847 URH1YDR400W 1023 nt8.87□□□□□ -0.99
MSH2P25847 GAL2YLR081W 1725 nt8.86□□□□□ -0.99
MSH2P25847 DMA2YNL116W 1569 nt8.85□□□□□ -0.99
MSH2P25847 LSR1LSR1 1175 nt8.84□□□□□ -0.99
MSH2P25847 CBK1YNL161W 2271 nt8.84□□□□□ -0.99
MSH2P25847 IMO32YGR031W 1029 nt8.83□□□□□ -1
MSH2P25847 ARO7YPR060C 771 nt8.83□□□□□ -1
MSH2P25847 MLS1YNL117W 1665 nt8.83□□□□□ -1
MSH2P25847 DLD3YEL071W 1491 nt8.83□□□□□ -1
MSH2P25847 YCR025CYCR025C 411 nt8.82□□□□□ -1
MSH2P25847 LCP5YER127W 1074 nt8.82□□□□□ -1
MSH2P25847 IPL1YPL209C 1104 nt8.82□□□□□ -1
MSH2P25847 YHR219WYHR219W 1875 nt8.82□□□□□ -1
MSH2P25847 TOK1YJL093C 2076 nt8.82□□□□□ -1
MSH2P25847 tA(AGC)DtA(AGC)D 73 nt8.81□□□□□ -1
MSH2P25847 tA(AGC)FtA(AGC)F 73 nt8.81□□□□□ -1
MSH2P25847 tA(AGC)GtA(AGC)G 73 nt8.81□□□□□ -1
MSH2P25847 tA(AGC)HtA(AGC)H 73 nt8.81□□□□□ -1
MSH2P25847 tA(AGC)JtA(AGC)J 73 nt8.81□□□□□ -1
MSH2P25847 tA(AGC)K1tA(AGC)K1 73 nt8.81□□□□□ -1
MSH2P25847 tA(AGC)K2tA(AGC)K2 73 nt8.81□□□□□ -1
MSH2P25847 tA(AGC)LtA(AGC)L 73 nt8.81□□□□□ -1
MSH2P25847 tA(AGC)M1tA(AGC)M1 73 nt8.81□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms