Protein–RNA interactions for Protein: P16499

PDE6A, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6AP16499 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PDE6AP16499 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PDE6AP16499 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PDE6AP16499 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PDE6AP16499 AC010864.1-201ENST00000609407 1511 ntBASIC31.81■■■□□ 2.68
PDE6AP16499 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
PDE6AP16499 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
PDE6AP16499 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.8■■■□□ 2.68
PDE6AP16499 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PDE6AP16499 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.79■■■□□ 2.68
PDE6AP16499 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.78■■■□□ 2.68
PDE6AP16499 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.78■■■□□ 2.68
PDE6AP16499 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.78■■■□□ 2.68
PDE6AP16499 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PDE6AP16499 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.77■■■□□ 2.68
PDE6AP16499 ABHD17AP4-201ENST00000411545 909 ntBASIC31.77■■■□□ 2.68
PDE6AP16499 AL135925.1-201ENST00000605920 1701 ntBASIC31.76■■■□□ 2.67
PDE6AP16499 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.76■■■□□ 2.67
PDE6AP16499 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.76■■■□□ 2.67
PDE6AP16499 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
PDE6AP16499 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PDE6AP16499 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.75■■■□□ 2.67
PDE6AP16499 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PDE6AP16499 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PDE6AP16499 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.74■■■□□ 2.67
PDE6AP16499 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PDE6AP16499 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PDE6AP16499 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.73■■■□□ 2.67
PDE6AP16499 AC021231.2-201ENST00000594613 730 ntBASIC31.73■■■□□ 2.67
PDE6AP16499 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.73■■■□□ 2.67
PDE6AP16499 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PDE6AP16499 DUX4L29-201ENST00000425409 679 ntBASIC31.72■■■□□ 2.67
PDE6AP16499 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.7■■■□□ 2.67
PDE6AP16499 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
PDE6AP16499 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PDE6AP16499 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PDE6AP16499 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PDE6AP16499 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PDE6AP16499 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
PDE6AP16499 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.66■■■□□ 2.66
PDE6AP16499 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PDE6AP16499 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PDE6AP16499 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
PDE6AP16499 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.64■■■□□ 2.66
PDE6AP16499 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PDE6AP16499 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
PDE6AP16499 ZNRF2P2-203ENST00000454624 420 ntBASIC31.62■■■□□ 2.65
PDE6AP16499 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.61■■■□□ 2.65
PDE6AP16499 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.6■■■□□ 2.65
PDE6AP16499 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.6■■■□□ 2.65
PDE6AP16499 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PDE6AP16499 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDE6AP16499 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PDE6AP16499 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PDE6AP16499 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PDE6AP16499 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PDE6AP16499 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PDE6AP16499 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.56■■■□□ 2.64
PDE6AP16499 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.56■■■□□ 2.64
PDE6AP16499 MIR7108-201ENST00000614319 87 ntBASIC31.56■■■□□ 2.64
PDE6AP16499 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PDE6AP16499 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
PDE6AP16499 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
PDE6AP16499 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.55■■■□□ 2.64
PDE6AP16499 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
PDE6AP16499 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.54■■■□□ 2.64
PDE6AP16499 ST7-AS1-201ENST00000456775 1889 ntBASIC31.54■■■□□ 2.64
PDE6AP16499 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDE6AP16499 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PDE6AP16499 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
PDE6AP16499 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
PDE6AP16499 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PDE6AP16499 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
PDE6AP16499 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PDE6AP16499 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
PDE6AP16499 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
PDE6AP16499 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
PDE6AP16499 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PDE6AP16499 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.5■■■□□ 2.63
PDE6AP16499 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
PDE6AP16499 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PDE6AP16499 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.49■■■□□ 2.63
PDE6AP16499 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.48■■■□□ 2.63
PDE6AP16499 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDE6AP16499 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PDE6AP16499 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PDE6AP16499 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PDE6AP16499 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.47■■■□□ 2.63
PDE6AP16499 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.47■■■□□ 2.63
PDE6AP16499 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PDE6AP16499 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.47■■■□□ 2.63
PDE6AP16499 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDE6AP16499 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
PDE6AP16499 AC127502.1-201ENST00000399971 1502 ntBASIC31.45■■■□□ 2.63
PDE6AP16499 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PDE6AP16499 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.44■■■□□ 2.62
PDE6AP16499 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDE6AP16499 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.44■■■□□ 2.62
PDE6AP16499 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PDE6AP16499 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms