Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 DUX4L21-201ENST00000622058 1269 ntBASIC33.2■■■□□ 2.91
COL11A2P13942 DUX4L10-201ENST00000622460 1267 ntBASIC33.2■■■□□ 2.91
COL11A2P13942 DUX4L25-201ENST00000624915 1269 ntBASIC33.2■■■□□ 2.91
COL11A2P13942 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC33.18■■■□□ 2.9
COL11A2P13942 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC33.17■■■□□ 2.9
COL11A2P13942 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC33.17■■■□□ 2.9
COL11A2P13942 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
COL11A2P13942 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC33.16■■■□□ 2.9
COL11A2P13942 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC33.16■■■□□ 2.9
COL11A2P13942 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
COL11A2P13942 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC33.14■■■□□ 2.9
COL11A2P13942 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
COL11A2P13942 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
COL11A2P13942 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC33.13■■■□□ 2.89
COL11A2P13942 SRP68-213ENST00000629930 165 ntTSL 5 BASIC33.12■■■□□ 2.89
COL11A2P13942 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC33.12■■■□□ 2.89
COL11A2P13942 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
COL11A2P13942 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC33.1■■■□□ 2.89
COL11A2P13942 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC33.09■■■□□ 2.89
COL11A2P13942 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
COL11A2P13942 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
COL11A2P13942 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
COL11A2P13942 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
COL11A2P13942 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC33.06■■■□□ 2.88
COL11A2P13942 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
COL11A2P13942 HES6-205ENST00000409356 528 ntTSL 2 BASIC33.05■■■□□ 2.88
COL11A2P13942 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
COL11A2P13942 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC33.04■■■□□ 2.88
COL11A2P13942 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
COL11A2P13942 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
COL11A2P13942 EI24-212ENST00000615917 1407 ntTSL 2 BASIC33.03■■■□□ 2.88
COL11A2P13942 RARRES2P2-201ENST00000394842 485 ntBASIC33.03■■■□□ 2.88
COL11A2P13942 CHML-204ENST00000638121 920 ntTSL 2 BASIC33.03■■■□□ 2.88
COL11A2P13942 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC33.03■■■□□ 2.88
COL11A2P13942 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
COL11A2P13942 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC33.02■■■□□ 2.88
COL11A2P13942 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.02■■■□□ 2.88
COL11A2P13942 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
COL11A2P13942 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC33■■■□□ 2.87
COL11A2P13942 AC120057.4-201ENST00000624722 1615 ntBASIC32.99■■■□□ 2.87
COL11A2P13942 ABHD17AP5-201ENST00000580133 923 ntBASIC32.97■■■□□ 2.87
COL11A2P13942 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL11A2P13942 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.97■■■□□ 2.87
COL11A2P13942 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
COL11A2P13942 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL11A2P13942 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
COL11A2P13942 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
COL11A2P13942 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
COL11A2P13942 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
COL11A2P13942 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
COL11A2P13942 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL11A2P13942 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL11A2P13942 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.9■■■□□ 2.86
COL11A2P13942 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
COL11A2P13942 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
COL11A2P13942 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
COL11A2P13942 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.88■■■□□ 2.85
COL11A2P13942 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
COL11A2P13942 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
COL11A2P13942 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL11A2P13942 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL11A2P13942 GPX1-201ENST00000419349 1106 ntBASIC32.86■■■□□ 2.85
COL11A2P13942 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL11A2P13942 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
COL11A2P13942 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
COL11A2P13942 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.83■■■□□ 2.85
COL11A2P13942 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
COL11A2P13942 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
COL11A2P13942 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
COL11A2P13942 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.82■■■□□ 2.85
COL11A2P13942 LINC00273-201ENST00000539813 1452 ntBASIC32.82■■■□□ 2.84
COL11A2P13942 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.81■■■□□ 2.84
COL11A2P13942 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
COL11A2P13942 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
COL11A2P13942 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.78■■■□□ 2.84
COL11A2P13942 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.78■■■□□ 2.84
COL11A2P13942 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
COL11A2P13942 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
COL11A2P13942 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
COL11A2P13942 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
COL11A2P13942 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
COL11A2P13942 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
COL11A2P13942 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.74■■■□□ 2.83
COL11A2P13942 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
COL11A2P13942 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
COL11A2P13942 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.72■■■□□ 2.83
COL11A2P13942 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.72■■■□□ 2.83
COL11A2P13942 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
COL11A2P13942 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.71■■■□□ 2.83
COL11A2P13942 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.71■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms