Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cxcl1P12850 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Cxcl1P12850 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.1■□□□□ 0.81
Cxcl1P12850 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl1P12850 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl1P12850 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl1P12850 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl1P12850 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl1P12850 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl1P12850 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl1P12850 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cxcl1P12850 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl1P12850 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cxcl1P12850 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cxcl1P12850 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cxcl1P12850 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cxcl1P12850 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Cxcl1P12850 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl1P12850 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl1P12850 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl1P12850 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl1P12850 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl1P12850 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.06■□□□□ 0.8
Cxcl1P12850 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl1P12850 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl1P12850 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl1P12850 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.05■□□□□ 0.8
Cxcl1P12850 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl1P12850 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cxcl1P12850 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cxcl1P12850 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl1P12850 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cxcl1P12850 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcl1P12850 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.03■□□□□ 0.8
Cxcl1P12850 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcl1P12850 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcl1P12850 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcl1P12850 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
Cxcl1P12850 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cxcl1P12850 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cxcl1P12850 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cxcl1P12850 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cxcl1P12850 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl1P12850 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcl1P12850 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcl1P12850 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cxcl1P12850 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cxcl1P12850 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl1P12850 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.99■□□□□ 0.79
Cxcl1P12850 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl1P12850 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcl1P12850 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.98■□□□□ 0.79
Cxcl1P12850 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl1P12850 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl1P12850 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl1P12850 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cxcl1P12850 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcl1P12850 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl1P12850 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl1P12850 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcl1P12850 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl1P12850 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcl1P12850 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl1P12850 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcl1P12850 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcl1P12850 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcl1P12850 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl1P12850 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.91■□□□□ 0.78
Cxcl1P12850 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cxcl1P12850 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcl1P12850 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Cxcl1P12850 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.91■□□□□ 0.78
Cxcl1P12850 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcl1P12850 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl1P12850 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl1P12850 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cxcl1P12850 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl1P12850 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl1P12850 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl1P12850 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl1P12850 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.87■□□□□ 0.77
Cxcl1P12850 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl1P12850 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl1P12850 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcl1P12850 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.84■□□□□ 0.77
Cxcl1P12850 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl1P12850 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Cxcl1P12850 Gm16148-201ENSMUST00000119653 893 ntBASIC19.82■□□□□ 0.76
Cxcl1P12850 Gm24804-201ENSMUST00000174982 85 ntBASIC19.82■□□□□ 0.76
Cxcl1P12850 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl1P12850 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl1P12850 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl1P12850 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl1P12850 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcl1P12850 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcl1P12850 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl1P12850 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl1P12850 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl1P12850 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl1P12850 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms