Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
BMP3P12645 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
BMP3P12645 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
BMP3P12645 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
BMP3P12645 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
BMP3P12645 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
BMP3P12645 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.69■■■□□ 2.5
BMP3P12645 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.69■■■□□ 2.5
BMP3P12645 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
BMP3P12645 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
BMP3P12645 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
BMP3P12645 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
BMP3P12645 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
BMP3P12645 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
BMP3P12645 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.66■■■□□ 2.5
BMP3P12645 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.65■■■□□ 2.5
BMP3P12645 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.64■■■□□ 2.5
BMP3P12645 HLA-V-202ENST00000446817 847 ntBASIC30.64■■■□□ 2.5
BMP3P12645 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
BMP3P12645 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
BMP3P12645 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.63■■■□□ 2.49
BMP3P12645 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.62■■■□□ 2.49
BMP3P12645 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
BMP3P12645 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.61■■■□□ 2.49
BMP3P12645 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
BMP3P12645 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
BMP3P12645 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.6■■■□□ 2.49
BMP3P12645 AC010864.1-201ENST00000609407 1511 ntBASIC30.59■■■□□ 2.49
BMP3P12645 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.58■■■□□ 2.49
BMP3P12645 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
BMP3P12645 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
BMP3P12645 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.57■■■□□ 2.48
BMP3P12645 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
BMP3P12645 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
BMP3P12645 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
BMP3P12645 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
BMP3P12645 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
BMP3P12645 LINC01971-201ENST00000617888 1048 ntBASIC30.55■■■□□ 2.48
BMP3P12645 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.54■■■□□ 2.48
BMP3P12645 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.53■■■□□ 2.48
BMP3P12645 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.53■■■□□ 2.48
BMP3P12645 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
BMP3P12645 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.53■■■□□ 2.48
BMP3P12645 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.52■■■□□ 2.48
BMP3P12645 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.52■■■□□ 2.48
BMP3P12645 DUX4L11-201ENST00000611504 1267 ntBASIC30.51■■■□□ 2.47
BMP3P12645 DUX4L12-201ENST00000614593 1267 ntBASIC30.51■■■□□ 2.47
BMP3P12645 DUX4L14-201ENST00000621227 1267 ntBASIC30.51■■■□□ 2.47
BMP3P12645 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
BMP3P12645 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
BMP3P12645 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
BMP3P12645 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
BMP3P12645 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.47■■■□□ 2.47
BMP3P12645 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
BMP3P12645 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
BMP3P12645 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
BMP3P12645 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.46■■■□□ 2.47
BMP3P12645 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
BMP3P12645 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.45■■■□□ 2.47
BMP3P12645 MIR3648-2-201ENST00000581792 180 ntBASIC30.44■■■□□ 2.46
BMP3P12645 MIR3648-1-201ENST00000615959 180 ntBASIC30.44■■■□□ 2.46
BMP3P12645 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.43■■■□□ 2.46
BMP3P12645 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.43■■■□□ 2.46
BMP3P12645 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
BMP3P12645 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.42■■■□□ 2.46
BMP3P12645 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.41■■■□□ 2.46
BMP3P12645 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
BMP3P12645 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
BMP3P12645 AL135925.1-201ENST00000605920 1701 ntBASIC30.41■■■□□ 2.46
BMP3P12645 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.4■■■□□ 2.46
BMP3P12645 AC016575.1-201ENST00000607026 382 ntBASIC30.4■■■□□ 2.46
BMP3P12645 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.39■■■□□ 2.46
BMP3P12645 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.39■■■□□ 2.46
BMP3P12645 CR559946.2-201ENST00000623684 991 ntBASIC30.39■■■□□ 2.46
BMP3P12645 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
BMP3P12645 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.38■■■□□ 2.45
BMP3P12645 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
BMP3P12645 MIR639-201ENST00000384974 98 ntBASIC30.37■■■□□ 2.45
BMP3P12645 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
BMP3P12645 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
BMP3P12645 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
BMP3P12645 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
BMP3P12645 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.34■■■□□ 2.45
BMP3P12645 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
BMP3P12645 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
BMP3P12645 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
BMP3P12645 LINC00273-201ENST00000539813 1452 ntBASIC30.33■■■□□ 2.45
BMP3P12645 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
BMP3P12645 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
BMP3P12645 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
BMP3P12645 DUX4L13-201ENST00000554103 1267 ntBASIC30.33■■■□□ 2.45
BMP3P12645 DUX4L15-201ENST00000611059 1267 ntBASIC30.33■■■□□ 2.45
BMP3P12645 DUX4L23-201ENST00000615195 1269 ntBASIC30.33■■■□□ 2.45
BMP3P12645 DUX4L24-201ENST00000617576 1269 ntBASIC30.33■■■□□ 2.45
BMP3P12645 DUX4L22-201ENST00000618238 1269 ntBASIC30.33■■■□□ 2.45
BMP3P12645 DUX4L20-201ENST00000619712 1269 ntBASIC30.33■■■□□ 2.45
BMP3P12645 DUX4L21-201ENST00000622058 1269 ntBASIC30.33■■■□□ 2.45
BMP3P12645 DUX4L10-201ENST00000622460 1267 ntBASIC30.33■■■□□ 2.45
BMP3P12645 DUX4L25-201ENST00000624915 1269 ntBASIC30.33■■■□□ 2.45
BMP3P12645 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms