Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim1P0C8K7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smim1P0C8K7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smim1P0C8K7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim1P0C8K7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.78■□□□□ 0.28
Smim1P0C8K7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smim1P0C8K7 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.78■□□□□ 0.28
Smim1P0C8K7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim1P0C8K7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim1P0C8K7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smim1P0C8K7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim1P0C8K7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Smim1P0C8K7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smim1P0C8K7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim1P0C8K7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim1P0C8K7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim1P0C8K7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smim1P0C8K7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim1P0C8K7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.74■□□□□ 0.27
Smim1P0C8K7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim1P0C8K7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim1P0C8K7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim1P0C8K7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim1P0C8K7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smim1P0C8K7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.73■□□□□ 0.27
Smim1P0C8K7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smim1P0C8K7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.73■□□□□ 0.27
Smim1P0C8K7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim1P0C8K7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim1P0C8K7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim1P0C8K7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim1P0C8K7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim1P0C8K7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim1P0C8K7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smim1P0C8K7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.71■□□□□ 0.27
Smim1P0C8K7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim1P0C8K7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Smim1P0C8K7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smim1P0C8K7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim1P0C8K7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smim1P0C8K7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smim1P0C8K7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim1P0C8K7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smim1P0C8K7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim1P0C8K7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.7■□□□□ 0.26
Smim1P0C8K7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Smim1P0C8K7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smim1P0C8K7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim1P0C8K7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim1P0C8K7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim1P0C8K7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smim1P0C8K7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim1P0C8K7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim1P0C8K7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim1P0C8K7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim1P0C8K7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim1P0C8K7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim1P0C8K7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smim1P0C8K7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim1P0C8K7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Smim1P0C8K7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.65■□□□□ 0.26
Smim1P0C8K7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smim1P0C8K7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim1P0C8K7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim1P0C8K7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim1P0C8K7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim1P0C8K7 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.63■□□□□ 0.25
Smim1P0C8K7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim1P0C8K7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smim1P0C8K7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smim1P0C8K7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim1P0C8K7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim1P0C8K7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim1P0C8K7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim1P0C8K7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.61■□□□□ 0.25
Smim1P0C8K7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smim1P0C8K7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim1P0C8K7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim1P0C8K7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Smim1P0C8K7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim1P0C8K7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smim1P0C8K7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim1P0C8K7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim1P0C8K7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim1P0C8K7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Smim1P0C8K7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim1P0C8K7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim1P0C8K7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smim1P0C8K7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smim1P0C8K7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smim1P0C8K7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim1P0C8K7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim1P0C8K7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smim1P0C8K7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smim1P0C8K7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim1P0C8K7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.58■□□□□ 0.24
Smim1P0C8K7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim1P0C8K7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim1P0C8K7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.57■□□□□ 0.24
Smim1P0C8K7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms