Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.5■■□□□ 1.35
MRPL3P09001 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
MRPL3P09001 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
MRPL3P09001 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MRPL3P09001 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
MRPL3P09001 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MRPL3P09001 AC142086.6-201ENST00000621154 1765 ntBASIC23.47■■□□□ 1.35
MRPL3P09001 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MRPL3P09001 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
MRPL3P09001 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
MRPL3P09001 AL139393.2-201ENST00000608721 2025 ntBASIC23.45■■□□□ 1.35
MRPL3P09001 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MRPL3P09001 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MRPL3P09001 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.45■■□□□ 1.34
MRPL3P09001 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MRPL3P09001 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MRPL3P09001 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
MRPL3P09001 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MRPL3P09001 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.44■■□□□ 1.34
MRPL3P09001 AL133380.1-201ENST00000506013 324 ntBASIC23.43■■□□□ 1.34
MRPL3P09001 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
MRPL3P09001 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MRPL3P09001 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MRPL3P09001 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MRPL3P09001 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.42■■□□□ 1.34
MRPL3P09001 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
MRPL3P09001 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
MRPL3P09001 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
MRPL3P09001 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MRPL3P09001 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MRPL3P09001 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MRPL3P09001 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
MRPL3P09001 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.37■■□□□ 1.33
MRPL3P09001 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MRPL3P09001 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MRPL3P09001 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRPL3P09001 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MRPL3P09001 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.35■■□□□ 1.33
MRPL3P09001 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MRPL3P09001 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.34■■□□□ 1.33
MRPL3P09001 DRD5P2-201ENST00000421395 2012 ntBASIC23.34■■□□□ 1.33
MRPL3P09001 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MRPL3P09001 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MRPL3P09001 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MRPL3P09001 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
MRPL3P09001 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MRPL3P09001 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRPL3P09001 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
MRPL3P09001 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
MRPL3P09001 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.31■■□□□ 1.32
MRPL3P09001 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.31■■□□□ 1.32
MRPL3P09001 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MRPL3P09001 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL3P09001 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL3P09001 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL3P09001 AC010864.1-201ENST00000609407 1511 ntBASIC23.3■■□□□ 1.32
MRPL3P09001 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
MRPL3P09001 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.29■■□□□ 1.32
MRPL3P09001 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.28■■□□□ 1.32
MRPL3P09001 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.28■■□□□ 1.32
MRPL3P09001 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
MRPL3P09001 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
MRPL3P09001 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
MRPL3P09001 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
MRPL3P09001 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MRPL3P09001 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
MRPL3P09001 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MRPL3P09001 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
MRPL3P09001 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
MRPL3P09001 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MRPL3P09001 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MRPL3P09001 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
MRPL3P09001 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MRPL3P09001 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
MRPL3P09001 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.21■■□□□ 1.31
MRPL3P09001 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MRPL3P09001 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.21■■□□□ 1.31
MRPL3P09001 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
MRPL3P09001 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
MRPL3P09001 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.19■■□□□ 1.3
MRPL3P09001 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MRPL3P09001 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.19■■□□□ 1.3
MRPL3P09001 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRPL3P09001 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
MRPL3P09001 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.18■■□□□ 1.3
MRPL3P09001 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MRPL3P09001 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
MRPL3P09001 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.17■■□□□ 1.3
MRPL3P09001 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
MRPL3P09001 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.17■■□□□ 1.3
MRPL3P09001 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MRPL3P09001 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.15■■□□□ 1.3
MRPL3P09001 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL3P09001 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.14■■□□□ 1.29
MRPL3P09001 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL3P09001 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL3P09001 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL3P09001 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MRPL3P09001 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MRPL3P09001 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms