Protein–RNA interactions for Protein: P07942

LAMB1, Laminin subunit beta-1, humanhuman

Predictions only

Length 1,786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1P07942 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
LAMB1P07942 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.71■■■□□ 2.67
LAMB1P07942 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
LAMB1P07942 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
LAMB1P07942 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
LAMB1P07942 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.69■■■□□ 2.66
LAMB1P07942 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
LAMB1P07942 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
LAMB1P07942 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.68■■■□□ 2.66
LAMB1P07942 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
LAMB1P07942 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.67■■■□□ 2.66
LAMB1P07942 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
LAMB1P07942 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
LAMB1P07942 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
LAMB1P07942 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.66■■■□□ 2.66
LAMB1P07942 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
LAMB1P07942 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
LAMB1P07942 AC108673.1-201ENST00000510422 1159 ntBASIC31.65■■■□□ 2.66
LAMB1P07942 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
LAMB1P07942 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
LAMB1P07942 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
LAMB1P07942 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
LAMB1P07942 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
LAMB1P07942 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
LAMB1P07942 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
LAMB1P07942 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
LAMB1P07942 LINC01971-201ENST00000617888 1048 ntBASIC31.61■■■□□ 2.65
LAMB1P07942 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
LAMB1P07942 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
LAMB1P07942 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
LAMB1P07942 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
LAMB1P07942 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
LAMB1P07942 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
LAMB1P07942 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
LAMB1P07942 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.58■■■□□ 2.65
LAMB1P07942 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
LAMB1P07942 DUX4L11-201ENST00000611504 1267 ntBASIC31.58■■■□□ 2.65
LAMB1P07942 DUX4L12-201ENST00000614593 1267 ntBASIC31.58■■■□□ 2.65
LAMB1P07942 DUX4L14-201ENST00000621227 1267 ntBASIC31.58■■■□□ 2.65
LAMB1P07942 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.56■■■□□ 2.64
LAMB1P07942 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.56■■■□□ 2.64
LAMB1P07942 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
LAMB1P07942 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.56■■■□□ 2.64
LAMB1P07942 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
LAMB1P07942 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.55■■■□□ 2.64
LAMB1P07942 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.55■■■□□ 2.64
LAMB1P07942 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
LAMB1P07942 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
LAMB1P07942 MIR6090-201ENST00000622481 60 ntBASIC31.53■■■□□ 2.64
LAMB1P07942 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
LAMB1P07942 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
LAMB1P07942 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.53■■■□□ 2.64
LAMB1P07942 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LAMB1P07942 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LAMB1P07942 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.52■■■□□ 2.64
LAMB1P07942 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.51■■■□□ 2.64
LAMB1P07942 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
LAMB1P07942 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
LAMB1P07942 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
LAMB1P07942 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.49■■■□□ 2.63
LAMB1P07942 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
LAMB1P07942 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
LAMB1P07942 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.48■■■□□ 2.63
LAMB1P07942 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
LAMB1P07942 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LAMB1P07942 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LAMB1P07942 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
LAMB1P07942 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.63
LAMB1P07942 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
LAMB1P07942 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
LAMB1P07942 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
LAMB1P07942 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.45■■■□□ 2.62
LAMB1P07942 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
LAMB1P07942 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
LAMB1P07942 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
LAMB1P07942 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LAMB1P07942 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
LAMB1P07942 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.41■■■□□ 2.62
LAMB1P07942 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
LAMB1P07942 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LAMB1P07942 AC010864.1-201ENST00000609407 1511 ntBASIC31.4■■■□□ 2.62
LAMB1P07942 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
LAMB1P07942 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
LAMB1P07942 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.38■■■□□ 2.61
LAMB1P07942 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.38■■■□□ 2.61
LAMB1P07942 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.38■■■□□ 2.61
LAMB1P07942 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.38■■■□□ 2.61
LAMB1P07942 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.38■■■□□ 2.61
LAMB1P07942 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.38■■■□□ 2.61
LAMB1P07942 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
LAMB1P07942 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.38■■■□□ 2.61
LAMB1P07942 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.38■■■□□ 2.61
LAMB1P07942 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.38■■■□□ 2.61
LAMB1P07942 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.37■■■□□ 2.61
LAMB1P07942 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
LAMB1P07942 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LAMB1P07942 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.36■■■□□ 2.61
LAMB1P07942 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
LAMB1P07942 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
LAMB1P07942 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 300.7 ms