Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSDP07339 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSDP07339 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CTSDP07339 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSDP07339 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSDP07339 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSDP07339 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSDP07339 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CTSDP07339 AL121749.1-202ENST00000609313 2153 ntBASIC21.75■■□□□ 1.07
CTSDP07339 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSDP07339 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSDP07339 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CTSDP07339 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CTSDP07339 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSDP07339 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTSDP07339 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTSDP07339 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSDP07339 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSDP07339 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSDP07339 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.72■■□□□ 1.07
CTSDP07339 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.71■■□□□ 1.07
CTSDP07339 AL031258.1-201ENST00000623562 325 ntBASIC21.71■■□□□ 1.07
CTSDP07339 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.71■■□□□ 1.07
CTSDP07339 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CTSDP07339 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTSDP07339 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.7■■□□□ 1.06
CTSDP07339 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.7■■□□□ 1.06
CTSDP07339 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSDP07339 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSDP07339 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSDP07339 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSDP07339 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTSDP07339 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSDP07339 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.69■■□□□ 1.06
CTSDP07339 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSDP07339 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSDP07339 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.67■■□□□ 1.06
CTSDP07339 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSDP07339 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTSDP07339 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTSDP07339 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.66■■□□□ 1.06
CTSDP07339 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSDP07339 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CTSDP07339 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSDP07339 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CTSDP07339 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSDP07339 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.64■■□□□ 1.06
CTSDP07339 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTSDP07339 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CTSDP07339 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSDP07339 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSDP07339 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSDP07339 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.61■■□□□ 1.05
CTSDP07339 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSDP07339 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CTSDP07339 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.61■■□□□ 1.05
CTSDP07339 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSDP07339 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CTSDP07339 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSDP07339 WASH5P-204ENST00000632292 975 ntBASIC21.6■■□□□ 1.05
CTSDP07339 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.59■■□□□ 1.05
CTSDP07339 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSDP07339 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSDP07339 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CTSDP07339 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CTSDP07339 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTSDP07339 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSDP07339 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSDP07339 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
CTSDP07339 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTSDP07339 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.55■■□□□ 1.04
CTSDP07339 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CTSDP07339 AC010864.1-201ENST00000609407 1511 ntBASIC21.55■■□□□ 1.04
CTSDP07339 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.54■■□□□ 1.04
CTSDP07339 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTSDP07339 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTSDP07339 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTSDP07339 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CTSDP07339 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSDP07339 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CTSDP07339 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTSDP07339 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSDP07339 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSDP07339 BX255925.1-201ENST00000566954 1854 ntBASIC21.52■■□□□ 1.04
CTSDP07339 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CTSDP07339 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSDP07339 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSDP07339 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSDP07339 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTSDP07339 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTSDP07339 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.51■■□□□ 1.03
CTSDP07339 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms