Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
P06344 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P06344 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P06344 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.81■■□□□ 1.08
P06344 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
P06344 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
P06344 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
P06344 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
P06344 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.77■■□□□ 1.08
P06344 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
P06344 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
P06344 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P06344 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P06344 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
P06344 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P06344 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
P06344 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P06344 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
P06344 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
P06344 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
P06344 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
P06344 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
P06344 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
P06344 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
P06344 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
P06344 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
P06344 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
P06344 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.68■■□□□ 1.06
P06344 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
P06344 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
P06344 Gm6821-201ENSMUST00000107540 542 ntBASIC21.66■■□□□ 1.06
P06344 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
P06344 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.66■■□□□ 1.06
P06344 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
P06344 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
P06344 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
P06344 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
P06344 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P06344 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
P06344 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P06344 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P06344 Gm8503-201ENSMUST00000118131 455 ntBASIC21.63■■□□□ 1.05
P06344 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P06344 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
P06344 Amer2-203ENSMUST00000225247 2662 ntBASIC21.63■■□□□ 1.05
P06344 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
P06344 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
P06344 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.62■■□□□ 1.05
P06344 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.62■■□□□ 1.05
P06344 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
P06344 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.61■■□□□ 1.05
P06344 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.61■■□□□ 1.05
P06344 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P06344 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P06344 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.6■■□□□ 1.05
P06344 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.59■■□□□ 1.05
P06344 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
P06344 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
P06344 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
P06344 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.58■■□□□ 1.05
P06344 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
P06344 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
P06344 Nkain2-201ENSMUST00000092602 558 ntBASIC21.57■■□□□ 1.04
P06344 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.56■■□□□ 1.04
P06344 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
P06344 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
P06344 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P06344 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P06344 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
P06344 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.55■■□□□ 1.04
P06344 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P06344 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
P06344 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
P06344 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
P06344 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P06344 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P06344 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
P06344 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
P06344 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
P06344 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.52■■□□□ 1.04
P06344 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
P06344 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
P06344 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P06344 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P06344 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
P06344 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
P06344 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
P06344 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P06344 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
P06344 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
P06344 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.49■■□□□ 1.03
P06344 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.49■■□□□ 1.03
P06344 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
P06344 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
P06344 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
P06344 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.46■■□□□ 1.03
P06344 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
P06344 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
P06344 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.45■■□□□ 1.02
P06344 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms