Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.93■■■□□ 2.7
CHGBP05060 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CHGBP05060 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CHGBP05060 MIR6090-201ENST00000622481 60 ntBASIC31.93■■■□□ 2.7
CHGBP05060 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHGBP05060 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.91■■■□□ 2.7
CHGBP05060 ABCB10P1-201ENST00000614297 2181 ntBASIC31.91■■■□□ 2.7
CHGBP05060 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CHGBP05060 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHGBP05060 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.89■■■□□ 2.7
CHGBP05060 AC010864.1-201ENST00000609407 1511 ntBASIC31.88■■■□□ 2.69
CHGBP05060 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.88■■■□□ 2.69
CHGBP05060 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHGBP05060 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.87■■■□□ 2.69
CHGBP05060 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.87■■■□□ 2.69
CHGBP05060 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
CHGBP05060 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
CHGBP05060 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CHGBP05060 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHGBP05060 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHGBP05060 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHGBP05060 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CHGBP05060 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHGBP05060 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.83■■■□□ 2.69
CHGBP05060 ST7-AS1-201ENST00000456775 1889 ntBASIC31.83■■■□□ 2.69
CHGBP05060 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CHGBP05060 AC044849.2-201ENST00000606596 710 ntBASIC31.83■■■□□ 2.69
CHGBP05060 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHGBP05060 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.81■■■□□ 2.68
CHGBP05060 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHGBP05060 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
CHGBP05060 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHGBP05060 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHGBP05060 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.76■■■□□ 2.68
CHGBP05060 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CHGBP05060 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
CHGBP05060 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CHGBP05060 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHGBP05060 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CHGBP05060 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.71■■■□□ 2.67
CHGBP05060 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHGBP05060 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
CHGBP05060 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.7■■■□□ 2.67
CHGBP05060 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
CHGBP05060 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.7■■■□□ 2.67
CHGBP05060 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHGBP05060 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHGBP05060 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.69■■■□□ 2.66
CHGBP05060 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHGBP05060 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHGBP05060 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
CHGBP05060 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHGBP05060 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHGBP05060 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHGBP05060 AC108673.1-201ENST00000510422 1159 ntBASIC31.68■■■□□ 2.66
CHGBP05060 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CHGBP05060 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHGBP05060 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.67■■■□□ 2.66
CHGBP05060 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHGBP05060 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHGBP05060 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHGBP05060 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.65■■■□□ 2.66
CHGBP05060 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
CHGBP05060 AC021231.2-201ENST00000594613 730 ntBASIC31.63■■■□□ 2.65
CHGBP05060 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHGBP05060 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHGBP05060 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHGBP05060 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHGBP05060 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHGBP05060 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHGBP05060 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHGBP05060 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.61■■■□□ 2.65
CHGBP05060 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.6■■■□□ 2.65
CHGBP05060 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.6■■■□□ 2.65
CHGBP05060 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.59■■■□□ 2.65
CHGBP05060 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHGBP05060 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.59■■■□□ 2.65
CHGBP05060 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHGBP05060 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHGBP05060 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CHGBP05060 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.57■■■□□ 2.64
CHGBP05060 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHGBP05060 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHGBP05060 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHGBP05060 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHGBP05060 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.55■■■□□ 2.64
CHGBP05060 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHGBP05060 ABHD17AP4-201ENST00000411545 909 ntBASIC31.54■■■□□ 2.64
CHGBP05060 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.54■■■□□ 2.64
CHGBP05060 AC127502.1-201ENST00000399971 1502 ntBASIC31.54■■■□□ 2.64
CHGBP05060 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHGBP05060 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHGBP05060 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CHGBP05060 AC139426.1-201ENST00000568218 2529 ntBASIC31.51■■■□□ 2.64
CHGBP05060 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CHGBP05060 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.51■■■□□ 2.63
CHGBP05060 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.51■■■□□ 2.63
CHGBP05060 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CHGBP05060 DUX4L29-201ENST00000425409 679 ntBASIC31.5■■■□□ 2.63
CHGBP05060 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.5■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms