Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HIST1H2ABP04908 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.75■■□□□ 1.39
HIST1H2ABP04908 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
HIST1H2ABP04908 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HIST1H2ABP04908 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HIST1H2ABP04908 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
HIST1H2ABP04908 CAHM-201ENST00000604200 896 ntBASIC23.74■■□□□ 1.39
HIST1H2ABP04908 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HIST1H2ABP04908 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
HIST1H2ABP04908 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.73■■□□□ 1.39
HIST1H2ABP04908 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
HIST1H2ABP04908 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
HIST1H2ABP04908 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.73■■□□□ 1.39
HIST1H2ABP04908 AC139426.1-201ENST00000568218 2529 ntBASIC23.73■■□□□ 1.39
HIST1H2ABP04908 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HIST1H2ABP04908 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HIST1H2ABP04908 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HIST1H2ABP04908 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
HIST1H2ABP04908 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
HIST1H2ABP04908 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
HIST1H2ABP04908 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
HIST1H2ABP04908 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
HIST1H2ABP04908 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HIST1H2ABP04908 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HIST1H2ABP04908 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.71■■□□□ 1.39
HIST1H2ABP04908 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.7■■□□□ 1.39
HIST1H2ABP04908 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
HIST1H2ABP04908 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HIST1H2ABP04908 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HIST1H2ABP04908 AC010864.1-201ENST00000609407 1511 ntBASIC23.69■■□□□ 1.38
HIST1H2ABP04908 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
HIST1H2ABP04908 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HIST1H2ABP04908 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
HIST1H2ABP04908 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.68■■□□□ 1.38
HIST1H2ABP04908 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.67■■□□□ 1.38
HIST1H2ABP04908 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.67■■□□□ 1.38
HIST1H2ABP04908 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HIST1H2ABP04908 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.66■■□□□ 1.38
HIST1H2ABP04908 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HIST1H2ABP04908 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.64■■□□□ 1.37
HIST1H2ABP04908 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HIST1H2ABP04908 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
HIST1H2ABP04908 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.63■■□□□ 1.37
HIST1H2ABP04908 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HIST1H2ABP04908 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HIST1H2ABP04908 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HIST1H2ABP04908 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HIST1H2ABP04908 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HIST1H2ABP04908 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.62■■□□□ 1.37
HIST1H2ABP04908 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HIST1H2ABP04908 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
HIST1H2ABP04908 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.61■■□□□ 1.37
HIST1H2ABP04908 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HIST1H2ABP04908 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
HIST1H2ABP04908 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HIST1H2ABP04908 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
HIST1H2ABP04908 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HIST1H2ABP04908 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HIST1H2ABP04908 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HIST1H2ABP04908 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HIST1H2ABP04908 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.58■■□□□ 1.37
HIST1H2ABP04908 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
HIST1H2ABP04908 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
HIST1H2ABP04908 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
HIST1H2ABP04908 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HIST1H2ABP04908 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.55■■□□□ 1.36
HIST1H2ABP04908 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
HIST1H2ABP04908 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HIST1H2ABP04908 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
HIST1H2ABP04908 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HIST1H2ABP04908 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.53■■□□□ 1.36
HIST1H2ABP04908 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HIST1H2ABP04908 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HIST1H2ABP04908 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.52■■□□□ 1.36
HIST1H2ABP04908 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.52■■□□□ 1.36
HIST1H2ABP04908 AL139393.2-201ENST00000608721 2025 ntBASIC23.52■■□□□ 1.36
HIST1H2ABP04908 MIR762-201ENST00000390236 83 ntBASIC23.52■■□□□ 1.36
HIST1H2ABP04908 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HIST1H2ABP04908 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.52■■□□□ 1.36
HIST1H2ABP04908 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
HIST1H2ABP04908 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.52■■□□□ 1.36
HIST1H2ABP04908 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HIST1H2ABP04908 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HIST1H2ABP04908 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HIST1H2ABP04908 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.51■■□□□ 1.35
HIST1H2ABP04908 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.5■■□□□ 1.35
HIST1H2ABP04908 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
HIST1H2ABP04908 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HIST1H2ABP04908 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
HIST1H2ABP04908 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.49■■□□□ 1.35
HIST1H2ABP04908 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
HIST1H2ABP04908 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.49■■□□□ 1.35
HIST1H2ABP04908 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
HIST1H2ABP04908 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HIST1H2ABP04908 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HIST1H2ABP04908 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HIST1H2ABP04908 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
HIST1H2ABP04908 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HIST1H2ABP04908 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.46■■□□□ 1.35
HIST1H2ABP04908 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms