Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.72■□□□□ 0.59
P03980 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
P03980 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
P03980 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
P03980 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
P03980 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P03980 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P03980 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P03980 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P03980 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P03980 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
P03980 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P03980 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P03980 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
P03980 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P03980 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P03980 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P03980 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P03980 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
P03980 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
P03980 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P03980 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
P03980 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P03980 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
P03980 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P03980 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P03980 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
P03980 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P03980 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P03980 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P03980 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P03980 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
P03980 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P03980 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P03980 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.61■□□□□ 0.57
P03980 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P03980 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P03980 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P03980 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.6■□□□□ 0.57
P03980 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P03980 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.6■□□□□ 0.57
P03980 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P03980 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P03980 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P03980 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
P03980 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P03980 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P03980 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P03980 Gm8109-201ENSMUST00000194076 746 ntBASIC18.57■□□□□ 0.56
P03980 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P03980 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.56■□□□□ 0.56
P03980 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P03980 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P03980 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P03980 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P03980 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P03980 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P03980 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
P03980 Gm26115-201ENSMUST00000175605 87 ntBASIC18.54■□□□□ 0.56
P03980 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P03980 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P03980 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P03980 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P03980 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P03980 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P03980 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P03980 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P03980 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P03980 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P03980 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P03980 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P03980 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P03980 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
P03980 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
P03980 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P03980 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P03980 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
P03980 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P03980 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P03980 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.47■□□□□ 0.55
P03980 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P03980 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P03980 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P03980 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.46■□□□□ 0.55
P03980 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P03980 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P03980 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
P03980 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P03980 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P03980 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
P03980 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P03980 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P03980 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P03980 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P03980 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P03980 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
P03980 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.43■□□□□ 0.54
P03980 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
P03980 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.42■□□□□ 0.54
P03980 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 6.5 ms