Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTAP01374 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTAP01374 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.81■□□□□ 0.76
LTAP01374 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTAP01374 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
LTAP01374 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.8■□□□□ 0.76
LTAP01374 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTAP01374 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTAP01374 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTAP01374 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.79■□□□□ 0.76
LTAP01374 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.79■□□□□ 0.76
LTAP01374 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTAP01374 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LTAP01374 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LTAP01374 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LTAP01374 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LTAP01374 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.76■□□□□ 0.75
LTAP01374 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LTAP01374 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LTAP01374 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LTAP01374 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTAP01374 DYNLL1-208ENST00000550178 581 ntBASIC19.74■□□□□ 0.75
LTAP01374 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LTAP01374 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTAP01374 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LTAP01374 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.73■□□□□ 0.75
LTAP01374 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LTAP01374 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LTAP01374 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LTAP01374 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LTAP01374 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTAP01374 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTAP01374 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LTAP01374 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTAP01374 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTAP01374 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LTAP01374 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTAP01374 ZNRF2P1-201ENST00000441407 443 ntBASIC19.71■□□□□ 0.75
LTAP01374 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.71■□□□□ 0.75
LTAP01374 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LTAP01374 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LTAP01374 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LTAP01374 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LTAP01374 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LTAP01374 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.69■□□□□ 0.74
LTAP01374 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.69■□□□□ 0.74
LTAP01374 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LTAP01374 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LTAP01374 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LTAP01374 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LTAP01374 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.68■□□□□ 0.74
LTAP01374 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LTAP01374 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTAP01374 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LTAP01374 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
LTAP01374 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTAP01374 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.66■□□□□ 0.74
LTAP01374 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.66■□□□□ 0.74
LTAP01374 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LTAP01374 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTAP01374 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LTAP01374 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LTAP01374 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTAP01374 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTAP01374 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTAP01374 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LTAP01374 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTAP01374 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTAP01374 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTAP01374 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LTAP01374 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.63■□□□□ 0.73
LTAP01374 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTAP01374 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LTAP01374 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LTAP01374 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTAP01374 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTAP01374 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTAP01374 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
LTAP01374 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTAP01374 AL031258.1-201ENST00000623562 325 ntBASIC19.62■□□□□ 0.73
LTAP01374 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.62■□□□□ 0.73
LTAP01374 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTAP01374 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTAP01374 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.61■□□□□ 0.73
LTAP01374 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LTAP01374 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTAP01374 BX255925.1-201ENST00000566954 1854 ntBASIC19.59■□□□□ 0.73
LTAP01374 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTAP01374 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LTAP01374 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.58■□□□□ 0.73
LTAP01374 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
LTAP01374 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LTAP01374 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LTAP01374 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LTAP01374 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTAP01374 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LTAP01374 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTAP01374 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTAP01374 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTAP01374 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms