Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Cacna1hO88427 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Cacna1hO88427 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.84■■□□□ 1.57
Cacna1hO88427 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Cacna1hO88427 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Cacna1hO88427 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Cacna1hO88427 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.83■■□□□ 1.57
Cacna1hO88427 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Cacna1hO88427 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Cacna1hO88427 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.82■■□□□ 1.56
Cacna1hO88427 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cacna1hO88427 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cacna1hO88427 Gm5812-201ENSMUST00000061073 957 ntBASIC24.8■■□□□ 1.56
Cacna1hO88427 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cacna1hO88427 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Cacna1hO88427 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Cacna1hO88427 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cacna1hO88427 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Cacna1hO88427 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.78■■□□□ 1.56
Cacna1hO88427 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cacna1hO88427 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.78■■□□□ 1.56
Cacna1hO88427 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cacna1hO88427 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cacna1hO88427 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Cacna1hO88427 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.76■■□□□ 1.55
Cacna1hO88427 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Cacna1hO88427 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.74■■□□□ 1.55
Cacna1hO88427 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cacna1hO88427 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
Cacna1hO88427 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.74■■□□□ 1.55
Cacna1hO88427 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cacna1hO88427 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cacna1hO88427 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Cacna1hO88427 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.73■■□□□ 1.55
Cacna1hO88427 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Cacna1hO88427 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.72■■□□□ 1.55
Cacna1hO88427 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cacna1hO88427 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Cacna1hO88427 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Cacna1hO88427 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Cacna1hO88427 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.71■■□□□ 1.55
Cacna1hO88427 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cacna1hO88427 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cacna1hO88427 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Cacna1hO88427 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Cacna1hO88427 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cacna1hO88427 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cacna1hO88427 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Cacna1hO88427 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cacna1hO88427 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cacna1hO88427 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cacna1hO88427 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cacna1hO88427 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cacna1hO88427 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.66■■□□□ 1.54
Cacna1hO88427 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.65■■□□□ 1.54
Cacna1hO88427 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cacna1hO88427 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Cacna1hO88427 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Cacna1hO88427 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.63■■□□□ 1.53
Cacna1hO88427 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Cacna1hO88427 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.62■■□□□ 1.53
Cacna1hO88427 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.62■■□□□ 1.53
Cacna1hO88427 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.62■■□□□ 1.53
Cacna1hO88427 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.6■■□□□ 1.53
Cacna1hO88427 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.59■■□□□ 1.53
Cacna1hO88427 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cacna1hO88427 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cacna1hO88427 Gm7332-201ENSMUST00000118351 454 ntBASIC24.58■■□□□ 1.52
Cacna1hO88427 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cacna1hO88427 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.57■■□□□ 1.52
Cacna1hO88427 Gm4799-201ENSMUST00000095396 657 ntBASIC24.57■■□□□ 1.52
Cacna1hO88427 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cacna1hO88427 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cacna1hO88427 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cacna1hO88427 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Cacna1hO88427 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cacna1hO88427 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cacna1hO88427 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
Cacna1hO88427 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.54■■□□□ 1.52
Cacna1hO88427 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cacna1hO88427 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cacna1hO88427 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Cacna1hO88427 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.52■■□□□ 1.52
Cacna1hO88427 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.52■■□□□ 1.52
Cacna1hO88427 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cacna1hO88427 Gm11687-201ENSMUST00000118911 886 ntBASIC24.51■■□□□ 1.51
Cacna1hO88427 Scarna2-201ENSMUST00000157560 414 ntBASIC24.51■■□□□ 1.51
Cacna1hO88427 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna1hO88427 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna1hO88427 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna1hO88427 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cacna1hO88427 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cacna1hO88427 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cacna1hO88427 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cacna1hO88427 Gm9806-201ENSMUST00000051080 552 ntBASIC24.47■■□□□ 1.51
Cacna1hO88427 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.47■■□□□ 1.51
Cacna1hO88427 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.46■■□□□ 1.51
Cacna1hO88427 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.46■■□□□ 1.51
Cacna1hO88427 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Cacna1hO88427 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms