Protein–RNA interactions for Protein: O88255

Gm10509, Mszf57 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10509O88255 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm10509O88255 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm10509O88255 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm10509O88255 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10509O88255 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10509O88255 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10509O88255 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10509O88255 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10509O88255 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10509O88255 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.36■□□□□ 0.37
Gm10509O88255 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gm10509O88255 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Gm10509O88255 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10509O88255 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10509O88255 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10509O88255 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10509O88255 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10509O88255 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.34■□□□□ 0.37
Gm10509O88255 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10509O88255 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm10509O88255 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm10509O88255 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm10509O88255 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10509O88255 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10509O88255 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm10509O88255 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm10509O88255 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10509O88255 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10509O88255 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10509O88255 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm10509O88255 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm10509O88255 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm10509O88255 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm10509O88255 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm10509O88255 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10509O88255 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10509O88255 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10509O88255 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm10509O88255 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.25■□□□□ 0.35
Gm10509O88255 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10509O88255 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm10509O88255 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10509O88255 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10509O88255 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10509O88255 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10509O88255 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm10509O88255 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10509O88255 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10509O88255 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm10509O88255 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10509O88255 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Gm10509O88255 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gm10509O88255 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10509O88255 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10509O88255 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10509O88255 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10509O88255 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10509O88255 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10509O88255 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Gm10509O88255 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10509O88255 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10509O88255 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10509O88255 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Gm10509O88255 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10509O88255 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm10509O88255 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm10509O88255 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10509O88255 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.16■□□□□ 0.34
Gm10509O88255 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10509O88255 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gm10509O88255 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10509O88255 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10509O88255 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10509O88255 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10509O88255 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10509O88255 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.13■□□□□ 0.33
Gm10509O88255 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm10509O88255 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10509O88255 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10509O88255 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm10509O88255 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10509O88255 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.12■□□□□ 0.33
Gm10509O88255 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10509O88255 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm10509O88255 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10509O88255 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm10509O88255 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10509O88255 Zfp131-205ENSMUST00000223812 663 ntBASIC17.11■□□□□ 0.33
Gm10509O88255 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10509O88255 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm10509O88255 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10509O88255 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10509O88255 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10509O88255 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm10509O88255 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.1■□□□□ 0.33
Gm10509O88255 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.1■□□□□ 0.33
Gm10509O88255 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10509O88255 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10509O88255 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.09■□□□□ 0.33
Gm10509O88255 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms