Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.06■□□□□ 0.96
CLN5O75503 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLN5O75503 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.06■□□□□ 0.96
CLN5O75503 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLN5O75503 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLN5O75503 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLN5O75503 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLN5O75503 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLN5O75503 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CLN5O75503 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLN5O75503 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLN5O75503 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.03■□□□□ 0.96
CLN5O75503 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLN5O75503 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLN5O75503 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.02■□□□□ 0.96
CLN5O75503 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLN5O75503 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.02■□□□□ 0.96
CLN5O75503 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.02■□□□□ 0.96
CLN5O75503 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLN5O75503 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLN5O75503 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.01■□□□□ 0.95
CLN5O75503 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21■□□□□ 0.95
CLN5O75503 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21■□□□□ 0.95
CLN5O75503 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLN5O75503 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLN5O75503 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21■□□□□ 0.95
CLN5O75503 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLN5O75503 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLN5O75503 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.99■□□□□ 0.95
CLN5O75503 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN5O75503 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLN5O75503 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN5O75503 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CLN5O75503 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN5O75503 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.97■□□□□ 0.95
CLN5O75503 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN5O75503 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLN5O75503 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLN5O75503 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLN5O75503 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLN5O75503 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLN5O75503 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLN5O75503 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLN5O75503 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLN5O75503 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.94■□□□□ 0.94
CLN5O75503 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN5O75503 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN5O75503 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLN5O75503 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN5O75503 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN5O75503 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.92■□□□□ 0.94
CLN5O75503 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.92■□□□□ 0.94
CLN5O75503 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLN5O75503 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLN5O75503 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.91■□□□□ 0.94
CLN5O75503 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLN5O75503 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLN5O75503 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLN5O75503 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLN5O75503 ST7-AS1-201ENST00000456775 1889 ntBASIC20.9■□□□□ 0.94
CLN5O75503 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLN5O75503 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.9■□□□□ 0.94
CLN5O75503 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.9■□□□□ 0.94
CLN5O75503 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.9■□□□□ 0.94
CLN5O75503 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLN5O75503 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLN5O75503 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLN5O75503 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLN5O75503 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.89■□□□□ 0.93
CLN5O75503 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLN5O75503 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLN5O75503 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLN5O75503 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.88■□□□□ 0.93
CLN5O75503 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLN5O75503 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.88■□□□□ 0.93
CLN5O75503 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLN5O75503 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLN5O75503 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.87■□□□□ 0.93
CLN5O75503 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLN5O75503 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.86■□□□□ 0.93
CLN5O75503 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLN5O75503 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLN5O75503 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.84■□□□□ 0.93
CLN5O75503 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLN5O75503 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLN5O75503 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLN5O75503 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.83■□□□□ 0.92
CLN5O75503 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLN5O75503 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLN5O75503 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLN5O75503 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLN5O75503 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLN5O75503 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLN5O75503 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.81■□□□□ 0.92
CLN5O75503 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.81■□□□□ 0.92
CLN5O75503 WASH5P-204ENST00000632292 975 ntBASIC20.81■□□□□ 0.92
CLN5O75503 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLN5O75503 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLN5O75503 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLN5O75503 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms