Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pfdn2O70591 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn2O70591 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn2O70591 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn2O70591 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn2O70591 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn2O70591 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn2O70591 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Pfdn2O70591 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn2O70591 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn2O70591 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.84■□□□□ 0.77
Pfdn2O70591 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pfdn2O70591 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pfdn2O70591 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.83■□□□□ 0.77
Pfdn2O70591 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Pfdn2O70591 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pfdn2O70591 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pfdn2O70591 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pfdn2O70591 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn2O70591 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn2O70591 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pfdn2O70591 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn2O70591 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn2O70591 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pfdn2O70591 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pfdn2O70591 Gm26115-201ENSMUST00000175605 87 ntBASIC19.8■□□□□ 0.76
Pfdn2O70591 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pfdn2O70591 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn2O70591 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn2O70591 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pfdn2O70591 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pfdn2O70591 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.78■□□□□ 0.76
Pfdn2O70591 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.77■□□□□ 0.76
Pfdn2O70591 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn2O70591 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pfdn2O70591 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pfdn2O70591 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pfdn2O70591 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pfdn2O70591 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pfdn2O70591 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.76■□□□□ 0.75
Pfdn2O70591 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Pfdn2O70591 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn2O70591 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pfdn2O70591 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Pfdn2O70591 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pfdn2O70591 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn2O70591 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.74■□□□□ 0.75
Pfdn2O70591 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pfdn2O70591 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.74■□□□□ 0.75
Pfdn2O70591 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pfdn2O70591 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn2O70591 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pfdn2O70591 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pfdn2O70591 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pfdn2O70591 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
Pfdn2O70591 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pfdn2O70591 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Pfdn2O70591 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Pfdn2O70591 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn2O70591 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pfdn2O70591 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pfdn2O70591 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn2O70591 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn2O70591 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn2O70591 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn2O70591 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn2O70591 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.68■□□□□ 0.74
Pfdn2O70591 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn2O70591 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn2O70591 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn2O70591 Gm8109-201ENSMUST00000194076 746 ntBASIC19.67■□□□□ 0.74
Pfdn2O70591 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn2O70591 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pfdn2O70591 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn2O70591 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn2O70591 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn2O70591 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn2O70591 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pfdn2O70591 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn2O70591 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pfdn2O70591 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.63■□□□□ 0.73
Pfdn2O70591 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn2O70591 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn2O70591 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn2O70591 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pfdn2O70591 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.62■□□□□ 0.73
Pfdn2O70591 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn2O70591 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn2O70591 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn2O70591 Peli2-204ENSMUST00000226513 1320 ntBASIC19.61■□□□□ 0.73
Pfdn2O70591 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn2O70591 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn2O70591 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn2O70591 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pfdn2O70591 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.59■□□□□ 0.73
Pfdn2O70591 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn2O70591 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pfdn2O70591 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfdn2O70591 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfdn2O70591 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms