Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TBC1D4O60343 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TBC1D4O60343 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.08■■■□□ 2.09
TBC1D4O60343 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.07■■■□□ 2.08
TBC1D4O60343 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TBC1D4O60343 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.06■■■□□ 2.08
TBC1D4O60343 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TBC1D4O60343 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
TBC1D4O60343 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TBC1D4O60343 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.05■■■□□ 2.08
TBC1D4O60343 LINC01971-201ENST00000617888 1048 ntBASIC28.04■■■□□ 2.08
TBC1D4O60343 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.03■■■□□ 2.08
TBC1D4O60343 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TBC1D4O60343 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
TBC1D4O60343 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
TBC1D4O60343 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
TBC1D4O60343 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
TBC1D4O60343 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28■■■□□ 2.07
TBC1D4O60343 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
TBC1D4O60343 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TBC1D4O60343 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.99■■■□□ 2.07
TBC1D4O60343 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.99■■■□□ 2.07
TBC1D4O60343 DUX4L11-201ENST00000611504 1267 ntBASIC27.99■■■□□ 2.07
TBC1D4O60343 DUX4L12-201ENST00000614593 1267 ntBASIC27.99■■■□□ 2.07
TBC1D4O60343 DUX4L14-201ENST00000621227 1267 ntBASIC27.99■■■□□ 2.07
TBC1D4O60343 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TBC1D4O60343 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.98■■■□□ 2.07
TBC1D4O60343 MIR3648-2-201ENST00000581792 180 ntBASIC27.98■■■□□ 2.07
TBC1D4O60343 MIR3648-1-201ENST00000615959 180 ntBASIC27.98■■■□□ 2.07
TBC1D4O60343 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.97■■■□□ 2.07
TBC1D4O60343 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
TBC1D4O60343 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
TBC1D4O60343 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.96■■■□□ 2.07
TBC1D4O60343 MIR639-201ENST00000384974 98 ntBASIC27.96■■■□□ 2.07
TBC1D4O60343 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TBC1D4O60343 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.95■■■□□ 2.07
TBC1D4O60343 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.95■■■□□ 2.06
TBC1D4O60343 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.94■■■□□ 2.06
TBC1D4O60343 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.94■■■□□ 2.06
TBC1D4O60343 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.93■■■□□ 2.06
TBC1D4O60343 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.93■■■□□ 2.06
TBC1D4O60343 AC010864.1-201ENST00000609407 1511 ntBASIC27.92■■■□□ 2.06
TBC1D4O60343 AC016575.1-201ENST00000607026 382 ntBASIC27.91■■■□□ 2.06
TBC1D4O60343 CR559946.2-201ENST00000623684 991 ntBASIC27.91■■■□□ 2.06
TBC1D4O60343 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
TBC1D4O60343 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
TBC1D4O60343 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
TBC1D4O60343 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.9■■■□□ 2.06
TBC1D4O60343 MIR4449-201ENST00000578365 66 ntBASIC27.9■■■□□ 2.06
TBC1D4O60343 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
TBC1D4O60343 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
TBC1D4O60343 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.88■■■□□ 2.05
TBC1D4O60343 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
TBC1D4O60343 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
TBC1D4O60343 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
TBC1D4O60343 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TBC1D4O60343 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
TBC1D4O60343 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.87■■■□□ 2.05
TBC1D4O60343 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.86■■■□□ 2.05
TBC1D4O60343 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.86■■■□□ 2.05
TBC1D4O60343 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
TBC1D4O60343 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
TBC1D4O60343 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
TBC1D4O60343 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
TBC1D4O60343 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
TBC1D4O60343 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
TBC1D4O60343 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
TBC1D4O60343 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TBC1D4O60343 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TBC1D4O60343 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TBC1D4O60343 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TBC1D4O60343 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TBC1D4O60343 DUX4L13-201ENST00000554103 1267 ntBASIC27.81■■■□□ 2.04
TBC1D4O60343 DUX4L15-201ENST00000611059 1267 ntBASIC27.81■■■□□ 2.04
TBC1D4O60343 DUX4L23-201ENST00000615195 1269 ntBASIC27.81■■■□□ 2.04
TBC1D4O60343 DUX4L24-201ENST00000617576 1269 ntBASIC27.81■■■□□ 2.04
TBC1D4O60343 DUX4L22-201ENST00000618238 1269 ntBASIC27.81■■■□□ 2.04
TBC1D4O60343 DUX4L20-201ENST00000619712 1269 ntBASIC27.81■■■□□ 2.04
TBC1D4O60343 DUX4L21-201ENST00000622058 1269 ntBASIC27.81■■■□□ 2.04
TBC1D4O60343 DUX4L10-201ENST00000622460 1267 ntBASIC27.81■■■□□ 2.04
TBC1D4O60343 DUX4L25-201ENST00000624915 1269 ntBASIC27.81■■■□□ 2.04
TBC1D4O60343 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
TBC1D4O60343 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TBC1D4O60343 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
TBC1D4O60343 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.79■■■□□ 2.04
TBC1D4O60343 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
TBC1D4O60343 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TBC1D4O60343 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TBC1D4O60343 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.78■■■□□ 2.04
TBC1D4O60343 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
TBC1D4O60343 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.77■■■□□ 2.04
TBC1D4O60343 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.77■■■□□ 2.04
TBC1D4O60343 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TBC1D4O60343 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
TBC1D4O60343 LINC00273-201ENST00000539813 1452 ntBASIC27.76■■■□□ 2.04
TBC1D4O60343 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.76■■■□□ 2.03
TBC1D4O60343 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
TBC1D4O60343 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.75■■■□□ 2.03
TBC1D4O60343 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TBC1D4O60343 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms